| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3986 |
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| Symbol | |
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| ID | 3679660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 4951043 |
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| End bp | 4956667 |
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| Gene Length | 5625 bp |
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| Protein Length | 1874 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637719338 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_324486 |
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| Protein GI | 75910190 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCCTA ATTCAGAGAA TACAAATTAC CGCTTGTTAC TAGAAAATGC CATTTTAGAA
TTGCGGCGGA TGCGGTCTGA AGTTGATACT GTTGAGCAAT TACAGAAAGA ACCCATCGCT
ATTATTGGGA TGTCTTGCCG TTTACCTGGG GGTGTCAATA ACCCAGAGGA TTACTGGAAT
TTATTACATA ATGGGGTAGA TGCCATTAGC AAAATTCCTG CACAAAGATG GCCAGTAGAT
GAGTTTTATC ATCCAGACCC CGAAGTGTCG GGGAAAATGT ACACCCAGCA CGGCGGTTTT
TTAAATGAGG TAGACAAGTT CGATGCTCAG TTCTTTGGCA TCTCTCCCCG CGAAGCCGTC
AGCCTCGACC CCCAACAAAG GCTACTTTTG GAAGTAAGCT GGGAAGCGCT AGAAAATGCT
GGACAAGCAC CAGAAAAGTT AAATGGCAGT CCTACAGGGG TATTCGTCGG ACTATCTATG
GACGACTACT CACAACTGAG CTTTTATGGC GATCGCACTC AAATTGATGC CTACAATACT
TTAAGTATTC TCAGAAGTAT GGCGGCTGGG CGTTTAGCTT ACGTCTTGGG TCTGCAAGGC
GCTACCATGC AGTTAGATAC AGCTTGTTCT TCTTCTCTGT TAGGAGTGCA TCTAGCTTGC
CAAAGCCTCC GTTCTCAAGA ATGCAATATG GCTTTAGCTG GCGGTGTCAA CCTGATTCTC
TCACCAGATC CTTCCATTGG TCTGTGTAAA TTAAAAGCCT TATCTACTGA TGGTCGCTGT
AAAACTTTTG ATGCTAGCGC CGATGGTTAC GGACGCGGAG AAGGATGTGG CATAGTCCTA
CTCAAACGTT TATCTGATGC TTTAGCTGAT GGCGATCCTA TCCTGGCATT GATTCGGGGT
TCAGCATACA ATCATGATGG CTCTAGTAAT GGTTTGACAG CCCCCAATGG TTCGGCTCAA
GAAAAATTAC TTCGCAAAGC CTTAGAAAAT GCCAACGTCC AAGCCCATCA GATTCAATAT
GTGGAAACTC ACGGGACTGG TACACCCTTG GGCGATCCCA TCGAGGTGTT AGCCTTGGGA
GCAGTATTAG GTGAAGGTCG CTCAGAAGAT AATCCCCTAA CTATCGGTTC TGTCAAAACT
CAGGTTGGTC ATTTGGAATC AGCCGCCGGC GTTGCTGGAT TAATGAAAGT TGTATTAGCT
CTCCAGCACG CACAGATACC ACCACATTTA CATTTTCAAC AACCTAATCC CTATATTCCT
TGGGAAAAAC TGCCGGTTGT AGTGGCGACT CAGCCCACAC AATGGCCATT AGGGGCAGAT
GGACGACGAC TAGCTGGGGT CAGTTCCTTT GGCATGAGTG GTACAAATGT CCATCTGATT
TTGGAAGCAG CACCTTTAGA AAGTCAAAAG TTAAAAGTCA AAAGTCAAAA AGAAGAAGCA
ATTGAGCGTC CACTTCATCT TTTGAGTTTA TCGGCCAAAA CTGAATCAGC ACTACAGTCA
CTTGTCAGCC GTTACGAGTC CTTCCTGAAA GATGATAGCA AAGCAAATCT AGCAGATATT
TGTTTCAGTG CGAATACAGG GCGATCGCAT TTTGACCATC GTTTTGCTGT TGTCGCTGAA
TCTACTCAAG ACTTGCGTCA ACAATTGGCA GCTTTTACAG CAGGTAAAAC CCCAGGTGTG
AGCGGACAAT TACACAACAA AAAGCGCCCG AAAATCGCCT TTCTGTTTAC CGGACAGGGT
TCTCAGTATA TAGGTATGGG GCGAGAACTC TACGAAACCC AACCAACATT CCGGCAAACT
TTAGATCGTT GTGATGAAAT TCTCCGTCCT TATTTAGAAC AACCTTTACT GTCGGTTCTC
TATCCTGAAT CTGGGACTAG CCCTCTCAAT GAGACCGCCT ACACCCAACC AGCTTTGTTT
GCCCTAGAGT ATGCCGTCTG CCAGTTATGG AAATCTTGGG GCATAGAACC CACAGTAGTT
ATCGGTCATA GTTTGGGTGA ATATGTTGCC GCTTGTATCG CTGGAGTCTT TAGTCTGGAA
GATGGACTAA AATTAGTTGC TGCCCGCGCT CGCCTCATGC AGTCTCTACC TCAAGATGGG
GCAATGGTCA ATATATTCGC CTCCCAAGGG CGAGTATTGG CAGCTATTCA ACCTTATGCC
GATCAAGTAT CAATTGCTGC CATTAACGGC CCGGAGAGTG TCGTTATTTC TGGACAGCAT
CAAGCAGTCG CAGCCGTGAT GTCTACTCTC CAAAGCGAAG GCGTTAATAG TGTCAAATTA
AACGTTTCCC ATGCCTTCCA CTCTCCTTTA ATGGAACCAG TGTTAGCGGA ATTTGCGCGC
ATTGCCTCAG AAGTGAGCTT TTCATCTCCG AATATCAAAC TGATTTCTAA TGTTACCGGC
ACAGTAGTTA CCACAGAAAT CACCAATGCG GAATATTGGG TTAGACATTT GCGCCACTCC
GTGAGATTTG CTGCTGGGAT GGAAACCCTG GAGCAGCAAG GTTGCGACAT TTTTCTAGAG
GTCGGGCCAA AACCAGTTTT ACTGGGAATG GGTCGTAAGT GCCTCCCTGA AGGAGTAGGA
ATTTGGCTTC CTAGTTTGCG CCCACAACAG TCAGATTGGC AACAGCTACT GCAAAGCTTG
CAGGAATTAT ACTTACGTGG GGCATCAATC AACTGGTCTG GCTTTGACCA AGATTATCCC
CGTCATCGTC TAGTACTGCC AAATTATCCC TTTCAGCGCC AGCGTTACTG GGTTGAGACA
TCCCATCGCC AACAGACATT ACCTGCTAAG ACTAGCAAAA CTCTCCACCC TGTACTCGGT
CAACGGCTAA AATTACCATT TTCTCCAGAA ATTCGCTTTG AAACCCAATT TAGCCCCAAT
TCACACGCTT ACCTAGAGGA TCATCAATTA AACGGAGTCA GAATAGTTCC TGGTGCATCT
TATATCTCGA TGCTTCTATC CGCAGTTAGG GAGGCTTTCC CCAATGAATC TTGCATCATC
GAAGATTTGT TGTTTCAAAA TACGCTGGTT TGCCCAGATG ACGGCAGTAC AACAGTTCAG
TTGGTTTTGA CACCCCAAAC AACAGAAGAG ACTTCCTGGC AAATTATTAG TTTTTTAGGT
GGAGAAGCAG AAAACGAGGT CAACGCTTGG AAAACACATA GTACAGGAAA AGTCCGGCTG
TTCTCGCCAG TACCCAATTT CGTAGATGTG GCACAAGTCA AGGCTAGATG TTCTCAAGTT
TTATCGGGGA CGCAATTTTA CTCTAATTTT CAAGCAGTCG GCTACAGTTG GGGAACTTCA
TTTCAGTGGC TAGAAAATAT TTGGTATCAG GATGGAGAAG CAGTATGTCA AATGAAACTG
CCCCAATTAC CAGACGAACT CGATAACTAT CAACTTTATC CGGGATTAAT TGATTCATGC
TTGCAACTAC TAAACGTTTG CTGGGATATT AATCCTGCCG AGCAAGTCCA GAATGACTAT
ATGTACATTC CCTTTAGCAT CGGTAGCTTG AGATTCTATG GTCGTCCCCA TCCTGGTCAT
CAACTATGGT GTCATGGTCA AAAAACACCA ACATCTAATC AGCAAAGCTT AACTGGTGAC
GTACATCTGT TCGACCAAAA TGGGCAGTTA ATCGCCGAAA TCATCGGTTT TGAAGTCAGG
AAAGTCCGGC GGGCAACTCT GCTGCAAAGT CTGCAAAAAG ATTTAGGTGA TTGGCTGTAT
GAAGTAGCTT GGCAACCAAA GCCTCGTGAG CAAAATCATC AGTTAGCACA GACACAAGAG
TTAGGAAGTT GGCTGATATT TGCTGACGAG CAAGGAACGG CGGTTAAGTT AGCAAAACTA
CTCCAAGAAC GTGGCGATCG CCCCATCTTA GTTTCTCCTG GTGCAGAATA TCAAGCCAAT
GGCGAACATT ACTACATCAA CCCCTCAGAA CCACAAGATT TTCAGAGGTT AATTCAAGAA
AGCTTAGGTA ATCATCAACC TCCCTGCCGT GGGGTAGTAT ATCTGTGGGG GCTGGAGGAG
GCACGGGAGA CTTTAAATAC TGGCTGTGGT AATGTGCTGC ATTTGGTTCA AGCCTTGGCA
CAATCAACTT GGTCTAAGCC TCCCCGTTTG TGGTTAGTTA CCAGAGGAAC CCAGCCAGTA
GAGCCAATGT CTGATTCCTT AGCCATAAAT CAAGCTGCTT TGTGGGGCTT GGGACGTGTT
ATTTCCTTGG AACATCCAGA ATTGTCATGT GTGCGGTTGG ATTTAGACCC AGTTGGTAAT
GGGAACGAAA TTGAAGAATT ATTAGCAGAG TTGTTGTTCC CAGACCAAGA AGACGAAGTA
GCATTCCGTC AAGGAGTGCG GAAAGTCTCC CGGTTGGTGC GTCGCCAAGC TCAAACCCCC
ACGAATCAAC TGGCAATTGG TGAAGATGTG ACTTATTTGA TTACAGGTGG TCTAGGGGCG
CTAGGGCTGC AAGTTGCTCA GTGGATGGTA GCACAAGGAG CCAAAAACTT AGTTTTAACC
GGCAGGCGCG GAGTGGTTGG TGATACTCAA GTAGCTATCA ATCAACTACA GCAAGCAGGG
GCAAAAGTTC TAGTTGTCAC AGCAGATGTG TCCAACCCGG AAGATGTGGC TCAGATGTTA
GAAGCCATCA AAACTAACTA TCCACCCCTT AGAGGCATTT TTCACGCGGC TGGTGTTTTA
GATGACGGGG TATTATTGCA ACAAAATTGG AGCCGCTTTG CTAAAGTCCT AGCGCCCAAA
GTGCAAGGCG CATGGAACCT GCACACATTA ACCAAAGACC TACCTTTAGA TTTCTTTGTC
TGCTTCTCCT CGGTCGCTTC ATTACTTGGT TCACCCAGCC AAGGAAACTA TGCAGCCGCT
AATGCCTTCA TGGATGCCTT AGTTCATTAT CGTCGAGGTT TGGGTTTACC TGGTTTGAGC
ATTAACTGGG GGCCTTGGGC AGAAGTTGGG ATGGCAGCAG ATTTAGATAG TCGTAGCCAA
AAGCGCATAG CTGAGAGTGG TTTTGCTACT ATATCCTCAG AATTGGGATT GCAACTACTG
GGAGATTTAT TGAGACAAGA TGCCACCCAA GTTGGTGTGA TGTCAGTCAA TTGGGAGAAA
TTCCTCCAGC AATTCCCACC AGGAGGCGCA GCACCTTTAA TTGCTGATTT AGCTCCCCAA
ACCCAGCCAC AAAGCAATTC TGCACAATCA GGCAAACAAC TTGAACTGCT GCGTCAATTA
GAGGAAAATA TTGCTAGCGA TCGCCAAAAT GTTTTAATTG CTTACATTCA AACTGAGGTT
GCCCAAGTTC TCAGGTTTGA AGCATCCTAT CAACCAAATC CGCAACAGGG ATTTTTCGAT
ATGGGGATGG ACTCTCTCAT GTCCATCGAG TTGAAGAACC GACTGGAAAC CAGCTTAGGA
AATTCTCTGC CTTCAACTTT GACCTTTGAA TATCCCACAA TTGAATCTTT AGCTGAATAT
CTGCTCAACA ATATAATTTC CTTGACTGTA GCCGAGCCAG TTGTGGTGGA GCCGCAAATA
GAGGCTGAAG AGCAAACTGA TTTGTTAATA GATATTCAGC AATATTCTGA AGACGAATTA
GCAGCATTAG TTGACCAAGA ATTAGAGGCT TTGCTTGGTG TCTGA
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| Protein sequence | MSPNSENTNY RLLLENAILE LRRMRSEVDT VEQLQKEPIA IIGMSCRLPG GVNNPEDYWN
LLHNGVDAIS KIPAQRWPVD EFYHPDPEVS GKMYTQHGGF LNEVDKFDAQ FFGISPREAV
SLDPQQRLLL EVSWEALENA GQAPEKLNGS PTGVFVGLSM DDYSQLSFYG DRTQIDAYNT
LSILRSMAAG RLAYVLGLQG ATMQLDTACS SSLLGVHLAC QSLRSQECNM ALAGGVNLIL
SPDPSIGLCK LKALSTDGRC KTFDASADGY GRGEGCGIVL LKRLSDALAD GDPILALIRG
SAYNHDGSSN GLTAPNGSAQ EKLLRKALEN ANVQAHQIQY VETHGTGTPL GDPIEVLALG
AVLGEGRSED NPLTIGSVKT QVGHLESAAG VAGLMKVVLA LQHAQIPPHL HFQQPNPYIP
WEKLPVVVAT QPTQWPLGAD GRRLAGVSSF GMSGTNVHLI LEAAPLESQK LKVKSQKEEA
IERPLHLLSL SAKTESALQS LVSRYESFLK DDSKANLADI CFSANTGRSH FDHRFAVVAE
STQDLRQQLA AFTAGKTPGV SGQLHNKKRP KIAFLFTGQG SQYIGMGREL YETQPTFRQT
LDRCDEILRP YLEQPLLSVL YPESGTSPLN ETAYTQPALF ALEYAVCQLW KSWGIEPTVV
IGHSLGEYVA ACIAGVFSLE DGLKLVAARA RLMQSLPQDG AMVNIFASQG RVLAAIQPYA
DQVSIAAING PESVVISGQH QAVAAVMSTL QSEGVNSVKL NVSHAFHSPL MEPVLAEFAR
IASEVSFSSP NIKLISNVTG TVVTTEITNA EYWVRHLRHS VRFAAGMETL EQQGCDIFLE
VGPKPVLLGM GRKCLPEGVG IWLPSLRPQQ SDWQQLLQSL QELYLRGASI NWSGFDQDYP
RHRLVLPNYP FQRQRYWVET SHRQQTLPAK TSKTLHPVLG QRLKLPFSPE IRFETQFSPN
SHAYLEDHQL NGVRIVPGAS YISMLLSAVR EAFPNESCII EDLLFQNTLV CPDDGSTTVQ
LVLTPQTTEE TSWQIISFLG GEAENEVNAW KTHSTGKVRL FSPVPNFVDV AQVKARCSQV
LSGTQFYSNF QAVGYSWGTS FQWLENIWYQ DGEAVCQMKL PQLPDELDNY QLYPGLIDSC
LQLLNVCWDI NPAEQVQNDY MYIPFSIGSL RFYGRPHPGH QLWCHGQKTP TSNQQSLTGD
VHLFDQNGQL IAEIIGFEVR KVRRATLLQS LQKDLGDWLY EVAWQPKPRE QNHQLAQTQE
LGSWLIFADE QGTAVKLAKL LQERGDRPIL VSPGAEYQAN GEHYYINPSE PQDFQRLIQE
SLGNHQPPCR GVVYLWGLEE ARETLNTGCG NVLHLVQALA QSTWSKPPRL WLVTRGTQPV
EPMSDSLAIN QAALWGLGRV ISLEHPELSC VRLDLDPVGN GNEIEELLAE LLFPDQEDEV
AFRQGVRKVS RLVRRQAQTP TNQLAIGEDV TYLITGGLGA LGLQVAQWMV AQGAKNLVLT
GRRGVVGDTQ VAINQLQQAG AKVLVVTADV SNPEDVAQML EAIKTNYPPL RGIFHAAGVL
DDGVLLQQNW SRFAKVLAPK VQGAWNLHTL TKDLPLDFFV CFSSVASLLG SPSQGNYAAA
NAFMDALVHY RRGLGLPGLS INWGPWAEVG MAADLDSRSQ KRIAESGFAT ISSELGLQLL
GDLLRQDATQ VGVMSVNWEK FLQQFPPGGA APLIADLAPQ TQPQSNSAQS GKQLELLRQL
EENIASDRQN VLIAYIQTEV AQVLRFEASY QPNPQQGFFD MGMDSLMSIE LKNRLETSLG
NSLPSTLTFE YPTIESLAEY LLNNIISLTV AEPVVVEPQI EAEEQTDLLI DIQQYSEDEL
AALVDQELEA LLGV
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