| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3948 |
|---|
| Symbol | |
|---|
| ID | 3682993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 4897900 |
|---|
| End bp | 4898514 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637719300 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_324448 |
|---|
| Protein GI | 75910152 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0198383 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTATGCTA AATATATACA ATTCCATCAA CATAGAGTCA TCACTAACCT CATATTAACC
ATGACTCAAC TCAAAAACAA ACTCACCCTA GAAGAATTTC TTGCACTCCC CGAAACAGAT
ATTATCTATG AATTAATTGA CGGAGAAGCT GTCCCCAAAC TTAAAAATGG TGAAATGTCG
CCAAAATTTT TTCATAGTTC CATAACAGGT GCATTATTTA TACTCTTATC TGCATGGGCG
CAAGGAAAGG GGCGAGTTGT CATTGAAAGG GCTATTAAAC TAACAAGAAA TCAACAAGAC
TGGGTTCCTG TAACAGATTT GGTCTATGTT TCTTATAACA GTCTTGCTGC TGATTGGTTG
CAAGATGAAG CTTGTCCTGT TGCACCGGAA TTAGTGATTG AAATTATCTC TCCTGGTCAA
ACCTTCGGAG AAATGATCGA AAAAGCAACA GATTATCTGA ATGCCAAAGT GAAGCGAGTT
TGGATTATTG ACCCTAGAGC AAAAACTGTG ACTATTTTCT ATGCTGATGC TCCTCCTCAA
ACTAAACGGG GTAATGATAG TTTAGAAGAT TCCCTATTTG TTGGGCTACA AATTACACCA
CAGCAAATCT TTTAA
|
|---|
| Protein sequence | MYAKYIQFHQ HRVITNLILT MTQLKNKLTL EEFLALPETD IIYELIDGEA VPKLKNGEMS
PKFFHSSITG ALFILLSAWA QGKGRVVIER AIKLTRNQQD WVPVTDLVYV SYNSLAADWL
QDEACPVAPE LVIEIISPGQ TFGEMIEKAT DYLNAKVKRV WIIDPRAKTV TIFYADAPPQ
TKRGNDSLED SLFVGLQITP QQIF
|
|---|
| |