Gene Ava_3935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3935 
Symbol 
ID3682980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4889446 
End bp4889922 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content41% 
IMG OID637719287 
Producthypothetical protein 
Protein accessionYP_324435 
Protein GI75910139 
COG category 
COG ID 
TIGRFAM ID[TIGR02935] probable nitrogen fixation protein 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0255327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCAG AAAATAACGT CAACGGCACT GCTACTAGTG TCGTCTCTAC CTCCCCATTT 
TTGAAAGCAT TAGTCTTACA AATTCGCGGA CAAGATGCTT ATGGAGTATA TCGTAGCTGG
TCTGATGATT TACTCCTCAA AGGCTTTGTT GTTACCAAAC AAAAGAAACG GGAAATTTCC
GTGCAAGGAG AAGTTGACCC CGTAACCATA TCACGGATTA TGTCCTTCTT TAAGGCGATC
GCCGCCAGAA TTGAACAAGA AACAGGCTTA ATCTCCCAAG TTGTACTTGA CTTAAGCCAT
GAAGGTTTTG GCTGGGCGTT AGTTTTTTCT GGTCGTCTAA TACTCACAGT TAAAACCTTA
AGAGATGCTC ATCGTTTTGG TTTTGACTCT TTGGAGAAAC TGGCGGAAGA AGGAGATAGA
TATGTTGCAA AAGGAGTTGA TTTAGCTAAT CGCTATAAAG AAGTAAGTAA GTTGTAA
 
Protein sequence
MTPENNVNGT ATSVVSTSPF LKALVLQIRG QDAYGVYRSW SDDLLLKGFV VTKQKKREIS 
VQGEVDPVTI SRIMSFFKAI AARIEQETGL ISQVVLDLSH EGFGWALVFS GRLILTVKTL
RDAHRFGFDS LEKLAEEGDR YVAKGVDLAN RYKEVSKL