| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3930 |
|---|
| Symbol | |
|---|
| ID | 3683507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 4883832 |
|---|
| End bp | 4885370 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637719282 |
|---|
| Product | nitrogenase molybdenum-iron protein beta chain |
|---|
| Protein accession | YP_324430 |
|---|
| Protein GI | 75910134 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
|---|
| TIGRFAM ID | [TIGR01286] nitrogenase molybdenum-iron protein beta chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.39743 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0737899 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCAGA ATCCTGAAAG AATTGTAGAC CACGTTGATC TATTCAAACA GCCAGAATAC
ACCGAGCTAT TTGAAAACAA GAGAAAGAAC TTTGAAGGCG CTCATCCTCC TGAAGAAGTT
GAAAGAGTGT CTGAATGGAC AAAATCTTGG GACTACCGCG AAAAGAACTT CGCTCGTGAA
GCTTTAACCG TTAACCCTGC TAAAGGTTGC CAACCTGTAG GCGCGATGTT CGCTGCTTTG
GGTTTTGAAG GTACTCTACC TTTCGTACAA GGTTCTCAAG GTTGCGTTGC TTACTTCCGT
ACACACCTCA GCCGTCACTA CAAAGAGCCT TGCTCCGCAG TATCTTCTTC CATGACAGAA
GACGCAGCAG TATTCGGTGG CTTGAACAAC ATGGTTGAAG GTATGCAGGT TGCTTACCAA
CTGTACAAGC CTAAGATGAT TGCTGTTTGC ACCACCTGTA TGGCTGAGGT TATCGGTGAT
GACTTAGGTG CGTTCATCAC CAACTCCAAG AATGCTGGTT CTATTCCTCA AGATTTCCCT
GTACCCTTTG CTCACACCCC CAGTTTCGTT GGTTCTCACG TAACTGGTTA CGACAACATG
ATGAAGGGTA TTCTGTCTAA CTTGACAGAA GGTAAGAAGA AAGCTACCAG CAACGGTAAA
ATCAACATCA TCCCTGGTTT TGATACCTAT GTAGGTAACA ACCGCGAAGT TAAGCGGATG
TTGGGTGTAA TGGGTGTTGA TTACACAATC CTGTCTGACA GCAGCGACTA CTTTGATTCA
CCAAACACTG GTGAGTACGA AATGTACCCA GGTGGTACCA AGTTGGAAGA TGCGGCTGAT
TCTATCAACG CTAAAGCTAC TGTTGCTCTC CAAGCTTACA CCACACCCAA GACCCGTGAG
TATATCAAAA CCCAGTGGAA GCAAGAAACA CAAGTATTGC GCCCCTTTGG TGTTAAGGGT
ACTGACGAGT TCTTAACAGC TATCTCTGAA TTGACCGGTA AGGCTATTCC TGAAGAGTTG
GAAATCGAAC GCGGTCGTTT AGTTGATGCT ATCACCGACT CTTACGCTTG GATTCATGGT
AAGAAGTTCG CTATTTACGG CGATCCAGAT TTGATCATCT CCATCACCAG CTTCTTGTTA
GAGATGGGTG CTGAACCAGT ACACATCCTC TGCAACAACG GTGATGACAC CTTCAAAAAA
GAAATGGAAG CTATCCTCGC TGCTAGCCCA TTTGGTAAAG AAGCTAAAGT CTGGATTCAA
AAAGACTTGT GGCACTTCCG TTCCTTGTTG TTCACCGAGC CTGTAGACTT CTTCATCGGT
AACTCCTACG GTAAGTACCT GTGGCGCGAT ACCAAGATCC CAATGGTGCG GATTGGTTAT
CCTCTCTTCG ATCGCCACCA CTTACACCGT TATTCTACTC TCGGCTACCA AGGTGGTCTA
AATATCCTCA ACTGGGTTGT TAACACCCTG TTGGATGAAA TGGATCGCAG CACCAACATC
ACTGGTAAGA CCGATATCTC CTTCGACTTG ATTCGCTAG
|
|---|
| Protein sequence | MPQNPERIVD HVDLFKQPEY TELFENKRKN FEGAHPPEEV ERVSEWTKSW DYREKNFARE
ALTVNPAKGC QPVGAMFAAL GFEGTLPFVQ GSQGCVAYFR THLSRHYKEP CSAVSSSMTE
DAAVFGGLNN MVEGMQVAYQ LYKPKMIAVC TTCMAEVIGD DLGAFITNSK NAGSIPQDFP
VPFAHTPSFV GSHVTGYDNM MKGILSNLTE GKKKATSNGK INIIPGFDTY VGNNREVKRM
LGVMGVDYTI LSDSSDYFDS PNTGEYEMYP GGTKLEDAAD SINAKATVAL QAYTTPKTRE
YIKTQWKQET QVLRPFGVKG TDEFLTAISE LTGKAIPEEL EIERGRLVDA ITDSYAWIHG
KKFAIYGDPD LIISITSFLL EMGAEPVHIL CNNGDDTFKK EMEAILAASP FGKEAKVWIQ
KDLWHFRSLL FTEPVDFFIG NSYGKYLWRD TKIPMVRIGY PLFDRHHLHR YSTLGYQGGL
NILNWVVNTL LDEMDRSTNI TGKTDISFDL IR
|
|---|
| |