Gene Ava_3887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3887 
Symbol 
ID3683618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4840914 
End bp4841702 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content43% 
IMG OID637719239 
ProductADP-ribosylation/crystallin J1 
Protein accessionYP_324387 
Protein GI75910091 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1397] ADP-ribosylglycohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGGTG CGATCGCAGG TGACATAATT GGTTCAGTTT ATGAGGGAAA CAGTATCAAA 
ACGAAAGATT TTCCCTTGTT TAGCAGGCAG AGTCGCTTCA CTGATGATAC AGTGCTAACT
GTGGCAGTGG CAGATGTGAT CCTCAACACT GATCAATTTC CGCAAAGCAG TAAATACATT
GACCAATTCA AGTGGTACTA TCGTCGCTAC CTATATGCAG GCTATGGACG TAACTTTAGT
AACTGGGCTA AATCTAACAG CACTCAACCA TACAATAGTT TTGGTAATGG TGCAGCTATG
CGCGTCAGTC CTATTGCCTT TGCCTTCCCA GATTTAAACA CTGTCTTACA ACAAGCTAAA
GGTAGTGCAG AAGTTACTCA TAACCACCCA GAAGGGATCA AAGGCGCACA AGCTACAGCA
TCCGCCATCT TCCTCGCTAG GACAGGCTGG GATAAAGCAG AGATTAAATC CTACATTCAA
GATAACTTTG GTTACAACCT AGAGCAAACC CTAGAACAAA TCAGACCGAC TTACCAATAT
GATGCTACCT GTCCAGGTTC CGTCCCCCCA GCAATTATTG CCTTTTTAGA ATCCTCGGAC
TTTGAAGATG CAATTCGCAA TGCCGTTTCC CTTGGTGGTG ATAGCGATAC CATCGCCTGT
ATTACTGGTG CAATCGCTCA AGCATACTAT GGAGGTGTAC CCAGAGCGAT CGCTGAACAA
ACTTTGTCTC ATTTAAATGA ACATTTATGT ACCACTACGG AAAAATTTAT GTATAAATAC
TGTCTTTAG
 
Protein sequence
MLGAIAGDII GSVYEGNSIK TKDFPLFSRQ SRFTDDTVLT VAVADVILNT DQFPQSSKYI 
DQFKWYYRRY LYAGYGRNFS NWAKSNSTQP YNSFGNGAAM RVSPIAFAFP DLNTVLQQAK
GSAEVTHNHP EGIKGAQATA SAIFLARTGW DKAEIKSYIQ DNFGYNLEQT LEQIRPTYQY
DATCPGSVPP AIIAFLESSD FEDAIRNAVS LGGDSDTIAC ITGAIAQAYY GGVPRAIAEQ
TLSHLNEHLC TTTEKFMYKY CL