Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3886 |
Symbol | |
ID | 3683617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4839222 |
End bp | 4840727 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637719238 |
Product | amino acid ABC transporter permease |
Protein accession | YP_324386 |
Protein GI | 75910090 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0765] ABC-type amino acid transport system, permease component [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAGC GGGTTTTTGG ACGTTGGTGT CTGGTGTTGA GCTTAATTTG TTTGTTACTT ACTGGTTGTA GTGGCAATTT AAGTCAAGAA AAAACTCTAA GGATAGCAAC AGAACCAGCC TTTCCACCTT TTGAGTTTAC AGGGCAAGGG GGAAATTTAC AGGGTTTTTC TATAGATTTG ATGAATGCCA TCGCCTCTGC TGCTAACTTG AGAGTAAGTT TCCAAAGTCT GCCTTTTGAC GGGATTATCC CCGCCTTGCA AAGCAGAACT GTAGACGCGG CGATTAGTTC CATCACCATC ACCGCCGAAC GGGCAAAAAC CGTTGCGTTC TCTCGTCCTT ATTTTAAAGC AGGGTTAGCG ATCGCTATTC GCTCCAGCGA TGAAGATATT ACAGGTTTTG ACAGTCTCAA AAATAAAAAA ATCGCCGTGC AGATTGGCAC AACCGGCGCA GAAAAAGCCA AAAGTATTCC AGGGGCGCAA ATTCGTAGCT TTGATTCTGC ACCCCTAGCC CTACAAGAAT TACTGAATAG CAATGTAGAT GCAGTCATCA ATGATGCACC TGTGACTTTA TATGCTATTA ATACAGGCAA TTTACAAGGA ATTAAAGTTG TCGAAAAGTT GCTAACAGAA GAATATTATG GTATTGCTAC AGCCCAAAAC TCACCTTATT TGGCACTAAT TAATGATGGA TTAAATCGGG TGTTAACAAA TGGTACCTAT TCCCAAATTT ACCAGAAATG GTTCAAAGCA GAACCACCAT CTTTACCAGA TAAATCACTC TATGAAAATC AAAATAATAC TCGTAAATCT AGCTCAATTA AACTGATTTT ACAGTTTCTC CCGACTTTAT TACAAGGTGC ATTAGTCACC ATACAACTGA CAATTTTGTC TACATTATTG GGGTTAATAT GTGGTACTTT AATTGCGTTG ATTCGTCTTT CCCAATTTAC CCCTGCACGT TTATTAGCCA GAGCTTATGT AGATTTCTTC CGGGGAACAC CTCTGCTAGT ACAAATTTTT ATGATTTACT TTGGAATACC AGCACTTGCT CAACAACTTG GTTTTACATT TAACTTTGAC CGTTGGGTAG CGGGAGTTAT TGCCTTAAGT GTAAATGCAG CCGCCTACAT CGCTGAAATT GTCCGTGCTG GTATTCAATC AATAGAAATT GGACAAACAG AAGCGGCTAA ATCATTAGGT TTAAATCCTT GGTTGACAAT GCGTCTGGTA ATTTTTCCCC AAGCCTTCCG GCGAATGTTA CCACCTTTGG GTAATGAGTT CATCAGTTTG TTAAAGGATA CGAGTTTAGT TGCCGTGATT GGATTTGAAG AGTTATTCCG CAAAGGGCAA TTGATTGTTG CAGACAACTA TCGTGCCTTT GAAATTTATG CGGCTGTCGC CATAGTATAT TTATGTTTAA CACTTTTAGC TTCTCAAGTT CTGAGCCGTT TAGAAATGTG GATGAATCCG ACCATGAAAG CTCAACAACG AAAAGCCAAA AGATGA
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Protein sequence | MSKRVFGRWC LVLSLICLLL TGCSGNLSQE KTLRIATEPA FPPFEFTGQG GNLQGFSIDL MNAIASAANL RVSFQSLPFD GIIPALQSRT VDAAISSITI TAERAKTVAF SRPYFKAGLA IAIRSSDEDI TGFDSLKNKK IAVQIGTTGA EKAKSIPGAQ IRSFDSAPLA LQELLNSNVD AVINDAPVTL YAINTGNLQG IKVVEKLLTE EYYGIATAQN SPYLALINDG LNRVLTNGTY SQIYQKWFKA EPPSLPDKSL YENQNNTRKS SSIKLILQFL PTLLQGALVT IQLTILSTLL GLICGTLIAL IRLSQFTPAR LLARAYVDFF RGTPLLVQIF MIYFGIPALA QQLGFTFNFD RWVAGVIALS VNAAAYIAEI VRAGIQSIEI GQTEAAKSLG LNPWLTMRLV IFPQAFRRML PPLGNEFISL LKDTSLVAVI GFEELFRKGQ LIVADNYRAF EIYAAVAIVY LCLTLLASQV LSRLEMWMNP TMKAQQRKAK R
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