Gene Ava_3869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3869 
Symbol 
ID3678509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4823842 
End bp4824756 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content41% 
IMG OID637719221 
ProductAraC family transcriptional regulator 
Protein accessionYP_324369 
Protein GI75910073 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTCGG AAGAGAAAAT CTTAAGTGTT GATTTTACTC AAGAAGATGC CTATACAGAA 
ATTCTACCGC GATCGCCCCT GGTTTCTAGT TATCATGCCC AATGGCAAGG TCTACGGTTA
GATGTTCACC AACAGCCCGG TCATGAAACT CCAGAACACA GCCCACAGCA ACACGTTCTC
ACTGTTAGTT TAGAGCAGCA AATAGTCCGT TCAGAGCGCA TACTTGATGG GCGTTTGCAG
TACGAGAATA TAGCTAAGGG CGATGTGGCA ATCATTCCTG CCCAAACTCG TCACATATCA
CGCTGGCAAT CAGAAGCAAA ATTTCTCGTC CTCAGCATGG AACCAGCTTT TTTTACACGT
ATGGTAATAG AAGCTGGAGA TTTACAGAAA ATTGAAATAA AACCTCGTTT TGCTGCACCA
GATCCTTTAA TTCAACAAAT TGGGCTAGCA CTCCAAACAG AACTAGAATC TGAGCATAAA
GGAAGTAGCA TTTACATTGA ATCTCTGACG ACCACGCTTT GTATTCACCT ACTCAAACAC
TATTGTGTAA CAGGTGGAAC CATCCTTGAC GACCATCATC ATAAAGGACT TTCACATTGG
AAACTCAGAC AAGCAATTTC CTACATTCAT GAAAATCTTG ATCAAGATTT GACTTTGGTT
GATATTTCCA CAGCAGTAGG AATGAGTATG TATTATTTTT CGCGCCAATT TAAGCAATCA
ACTGGTTTTG CACCACATCA ATATGTCATG AATTGCCGAA TTGAACGCGC AAAAAAGTTA
CTGGGTAGCA CTAACAAAAC CATAGAGCAA ATATGTACCC AAGTCGGCTT TCAAAGCCAA
AGCCACTTCA CAAATGTATT TCGTAAACTC ATGGGTATTA CACCCAGGGT ATACAGGGAA
CAAGTCAAGA CTTAA
 
Protein sequence
MMSEEKILSV DFTQEDAYTE ILPRSPLVSS YHAQWQGLRL DVHQQPGHET PEHSPQQHVL 
TVSLEQQIVR SERILDGRLQ YENIAKGDVA IIPAQTRHIS RWQSEAKFLV LSMEPAFFTR
MVIEAGDLQK IEIKPRFAAP DPLIQQIGLA LQTELESEHK GSSIYIESLT TTLCIHLLKH
YCVTGGTILD DHHHKGLSHW KLRQAISYIH ENLDQDLTLV DISTAVGMSM YYFSRQFKQS
TGFAPHQYVM NCRIERAKKL LGSTNKTIEQ ICTQVGFQSQ SHFTNVFRKL MGITPRVYRE
QVKT