Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3865 |
Symbol | |
ID | 3678505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4813602 |
End bp | 4814864 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637719217 |
Product | periplasmic sensor Signal transduction histidine kinase |
Protein accession | YP_324365 |
Protein GI | 75910069 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAATC GCAGTCGTCG CAATCTTGCC AGTTGGTTCA GCCTGGCAAT GGGTGGTATT TTAGTTGTGT TTGCGGCGGC GGTCTACTAT GTGAAGGTTG TAGATGAGTT AGAGGGGGTA GATCGATTAC TGTATAAAAA AACCACCGTA ATGGCGGCAA GTGTGAAGTC AGAACTGCAC AATCGTCAGC GCAGGGTAGA TTTGGACAAA GTACCTCTGT TGGGAACGAA GGTAGAACCA CTGCCAGATA GTCAATTAGT GTATGCAGGT TGGTATGATG AGCAGAAGCG ACTAGTGCAG TTTTTTGGTG AGACTCCGAG CGATCGCCTG TTAGTTGCTA GTGGATTTAA TACTATCAAA ATTAATAGCG AGTTATGGTT GCGTCAGGTA ACTTTGCCTG TTTACCAGGA TGGTTTATTA ATTGGCTATA TGCAGGCTGC CATGCCATTG ACAGATACGG AAGGTGCTTT AGCGGAGTTT CGGCTTGTTT TGGCTATTTC AGTCCCCATT ACTTTAGGAA TTATTGCTTT GACTGGTTGG TGGCTGGGGG GAGTGGCGAT GCAGCCAATT CGCCAAAGTT ACGATTATCT GCAACGGTTT ACGGCTGATG CTTCCCATGA ATTGCGATCG CCTCTATCTG CTATTGTCAG TAATGCCCAG TATGGCTTAC TAACAAAATC TACTGACCCA GAAACCCAAC GTCAGCGCCT ACAAAAGATT TTTGATATTG CCCAATCAAT GAGTATCCTA GTCAATGATT TGTTATTTTT AGCACGTTAT CAAGGGCGCA TACCCATCGA ATCTTTGCAA ACCGTTGACC TAAAAATTTT ACTTTTGCAA ATCAAAGATG ATTTTCTTAC CCATCCAGAA ACACAACATA TCAAGTTACT TTTCACGCTG CCAAATCATC GTATCAGCGT CCTTGGTGAT GCTAATCTAC TCCGTCAAGC AGTCATTAAT TTACTGAGTA ATGCTTGTAA ATATACTCCT GAAGGTGGTC AGGTTGAGTT ACAGCTATTT ACTCAGTCAA ATTGGGCTGC ACTCCAAGTT ATAGATAATG GTATTGGCAT TCCTCAAAAT GATGTGCCAT ATATTTTTGA ACGATTTTAT CGTGTAGATA AAAAGCGTTC TCGTAAGACT GGTGGATTCG GTTTGGGATT AGCTATTACC CAACAAATTA TCCAATCTCA TGGCGGTAAA ATTAATGTTC ACAGTGTAGT AAATAAAGGT ACAACTTTTC AAGTTTTATT ACCTCTGAAA TAG
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Protein sequence | MFNRSRRNLA SWFSLAMGGI LVVFAAAVYY VKVVDELEGV DRLLYKKTTV MAASVKSELH NRQRRVDLDK VPLLGTKVEP LPDSQLVYAG WYDEQKRLVQ FFGETPSDRL LVASGFNTIK INSELWLRQV TLPVYQDGLL IGYMQAAMPL TDTEGALAEF RLVLAISVPI TLGIIALTGW WLGGVAMQPI RQSYDYLQRF TADASHELRS PLSAIVSNAQ YGLLTKSTDP ETQRQRLQKI FDIAQSMSIL VNDLLFLARY QGRIPIESLQ TVDLKILLLQ IKDDFLTHPE TQHIKLLFTL PNHRISVLGD ANLLRQAVIN LLSNACKYTP EGGQVELQLF TQSNWAALQV IDNGIGIPQN DVPYIFERFY RVDKKRSRKT GGFGLGLAIT QQIIQSHGGK INVHSVVNKG TTFQVLLPLK
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