Gene Ava_3865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3865 
Symbol 
ID3678505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4813602 
End bp4814864 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content42% 
IMG OID637719217 
Productperiplasmic sensor Signal transduction histidine kinase 
Protein accessionYP_324365 
Protein GI75910069 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAATC GCAGTCGTCG CAATCTTGCC AGTTGGTTCA GCCTGGCAAT GGGTGGTATT 
TTAGTTGTGT TTGCGGCGGC GGTCTACTAT GTGAAGGTTG TAGATGAGTT AGAGGGGGTA
GATCGATTAC TGTATAAAAA AACCACCGTA ATGGCGGCAA GTGTGAAGTC AGAACTGCAC
AATCGTCAGC GCAGGGTAGA TTTGGACAAA GTACCTCTGT TGGGAACGAA GGTAGAACCA
CTGCCAGATA GTCAATTAGT GTATGCAGGT TGGTATGATG AGCAGAAGCG ACTAGTGCAG
TTTTTTGGTG AGACTCCGAG CGATCGCCTG TTAGTTGCTA GTGGATTTAA TACTATCAAA
ATTAATAGCG AGTTATGGTT GCGTCAGGTA ACTTTGCCTG TTTACCAGGA TGGTTTATTA
ATTGGCTATA TGCAGGCTGC CATGCCATTG ACAGATACGG AAGGTGCTTT AGCGGAGTTT
CGGCTTGTTT TGGCTATTTC AGTCCCCATT ACTTTAGGAA TTATTGCTTT GACTGGTTGG
TGGCTGGGGG GAGTGGCGAT GCAGCCAATT CGCCAAAGTT ACGATTATCT GCAACGGTTT
ACGGCTGATG CTTCCCATGA ATTGCGATCG CCTCTATCTG CTATTGTCAG TAATGCCCAG
TATGGCTTAC TAACAAAATC TACTGACCCA GAAACCCAAC GTCAGCGCCT ACAAAAGATT
TTTGATATTG CCCAATCAAT GAGTATCCTA GTCAATGATT TGTTATTTTT AGCACGTTAT
CAAGGGCGCA TACCCATCGA ATCTTTGCAA ACCGTTGACC TAAAAATTTT ACTTTTGCAA
ATCAAAGATG ATTTTCTTAC CCATCCAGAA ACACAACATA TCAAGTTACT TTTCACGCTG
CCAAATCATC GTATCAGCGT CCTTGGTGAT GCTAATCTAC TCCGTCAAGC AGTCATTAAT
TTACTGAGTA ATGCTTGTAA ATATACTCCT GAAGGTGGTC AGGTTGAGTT ACAGCTATTT
ACTCAGTCAA ATTGGGCTGC ACTCCAAGTT ATAGATAATG GTATTGGCAT TCCTCAAAAT
GATGTGCCAT ATATTTTTGA ACGATTTTAT CGTGTAGATA AAAAGCGTTC TCGTAAGACT
GGTGGATTCG GTTTGGGATT AGCTATTACC CAACAAATTA TCCAATCTCA TGGCGGTAAA
ATTAATGTTC ACAGTGTAGT AAATAAAGGT ACAACTTTTC AAGTTTTATT ACCTCTGAAA
TAG
 
Protein sequence
MFNRSRRNLA SWFSLAMGGI LVVFAAAVYY VKVVDELEGV DRLLYKKTTV MAASVKSELH 
NRQRRVDLDK VPLLGTKVEP LPDSQLVYAG WYDEQKRLVQ FFGETPSDRL LVASGFNTIK
INSELWLRQV TLPVYQDGLL IGYMQAAMPL TDTEGALAEF RLVLAISVPI TLGIIALTGW
WLGGVAMQPI RQSYDYLQRF TADASHELRS PLSAIVSNAQ YGLLTKSTDP ETQRQRLQKI
FDIAQSMSIL VNDLLFLARY QGRIPIESLQ TVDLKILLLQ IKDDFLTHPE TQHIKLLFTL
PNHRISVLGD ANLLRQAVIN LLSNACKYTP EGGQVELQLF TQSNWAALQV IDNGIGIPQN
DVPYIFERFY RVDKKRSRKT GGFGLGLAIT QQIIQSHGGK INVHSVVNKG TTFQVLLPLK