Gene Ava_3823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3823 
Symbol 
ID3678755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4759735 
End bp4760475 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content45% 
IMG OID637719175 
Productcytochrome c biogenesis protein, transmembrane region 
Protein accessionYP_324323 
Protein GI75910027 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.367359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGAGA CTCTGCAAAC CCAAATTTAC CAACTAGAAA AATTTGCTAA CACCCTTGTC 
TCTTACCAAC TGACACACCT GAGTTTGCTG AGTATTGGGA TCATTTTTGC CGCAGGGTTA
CTCACTAGCC TCACACCCTG TATGCTGTCC ATGTTGCCAA TTACTATTGG CTACATCGGT
GGTTATGAAG CCAAAAGTCG TTGGCAAGCA GCAGCCCAAT CAACTTGGTT TGCCTTGGGA
TTGGCGACTA CCCTAGCAGG ACTAGGCGTG GTAGCTGCTT TGGTTGGCAA AGTCTACGGT
CAGATAGGTA TTGGTTTACC GATTATTGTC AGTATCATTG CTATCTTGAT GGGGCTAAAC
TTACTAGAAG CTTTACCTCT GCAACTTCCA TCTTTTGGTG ATACTAATTG GATTCCCCAA
GACTTGCCTT CAGGGGTGCG TTCCTACGGT ATTGGCTTAA CTTTCGGCTT GGTCGCCTCC
CCTTGTAGTA CTCCTGTGTT AGCCAGTCTA CTAGGTTGGG TTGCCAACAC ACAAGATTTA
ATTTTAGGCG CTGTTTTGTT GATTTCTTAT ACAGCAGGCT ATGTAACTCC CTTGATTTTG
GCGGGTACTT TCACAGCATC AATTAAAAAG TTGCTGGAAC TGCGTCGCTG GTCTGGTTGG
ATAAATCCAG TTAGCGGTGC ATTATTGGTA GGATTTGGCG TATTTTCTCT AATTTCTCGG
ATTCCTCTAG GCAGTTTTTA A
 
Protein sequence
MLETLQTQIY QLEKFANTLV SYQLTHLSLL SIGIIFAAGL LTSLTPCMLS MLPITIGYIG 
GYEAKSRWQA AAQSTWFALG LATTLAGLGV VAALVGKVYG QIGIGLPIIV SIIAILMGLN
LLEALPLQLP SFGDTNWIPQ DLPSGVRSYG IGLTFGLVAS PCSTPVLASL LGWVANTQDL
ILGAVLLISY TAGYVTPLIL AGTFTASIKK LLELRRWSGW INPVSGALLV GFGVFSLISR
IPLGSF