Gene Ava_3816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3816 
Symbol 
ID3678748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4749577 
End bp4749984 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content36% 
IMG OID637719168 
Producthypothetical protein 
Protein accessionYP_324316 
Protein GI75910020 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000096587 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGTTC AGCTAGAAAA ACATCTTAGC AGTTTGAAAC GAGAAGGTGT CATTACAGAC 
TGGCATGATC GAAAAATTGG AGCAGGAAAA GAATGGGAAA ATGAGATAGA TATTCACCTA
AATACATCTC ACATAATTTT GCTACTTATT AGCCCAAGTT TTATGTCTTC AAACTATTGC
TGGGATGTTG AATTAAAACG GGCTATGGAA AGGCATCAAG CTCAAGAAGC TAGAGTTATA
CCAGTAATTA TTGAATTTGT TGATTGGATT AATGCACCAT TTGGAAGACT TCAAGCTCTC
CCCGAAGGTG CTAGACCTGT AAAAGAATGG GGAAATTATA ACAAGGCATT TTTAAGTGTT
GCTAAAGGTA TTCGGATAGT GGCAAAAGAA TTATTAGAAG ATTTATAA
 
Protein sequence
MRVQLEKHLS SLKREGVITD WHDRKIGAGK EWENEIDIHL NTSHIILLLI SPSFMSSNYC 
WDVELKRAME RHQAQEARVI PVIIEFVDWI NAPFGRLQAL PEGARPVKEW GNYNKAFLSV
AKGIRIVAKE LLEDL