Gene Ava_3804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3804 
Symbol 
ID3678774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4738796 
End bp4739251 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content45% 
IMG OID637719155 
ProductHolliday junction resolvase-like protein 
Protein accessionYP_324304 
Protein GI75910008 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0796335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAT ACATTTCAGC CTTGGGATTG GATGTGGGGC GTAAGCGCGT TGGTGTGGCT 
GGATGCGATC GCACTGGGTT GATTGCTACG GGAATCACCA CCGTTGAGCG TACATCTTTT
GACCGGGATG TCCAGCAAAT ACAAAATATA GTGAATGAAC GCCAGGTACA AGTTCTGGTT
GTAGGTTTGC CATATTCAAT GGATGGTTCC TTAGGATTTC AGGCTCGTCA AGTGCAGAAA
TTTACGTCAA GGCTGGCTAA AGCTTTGCAG TTACCTGTGG AATATGTTGA TGAGCGACTG
ACTTCTTTTC AAGCTGAACA GATGCTCATC GCTGAAAATG TTTCCCCATC ACGGAATAAA
GGTTTAATCG ATCGCAAGGC AGCAGCTTTG ATTTTGCAGC AGTGGTTGGA TATTAGACGA
ACTAATGCTC AGAGTTCAGT GGCAGTAGAG TATTGA
 
Protein sequence
MTKYISALGL DVGRKRVGVA GCDRTGLIAT GITTVERTSF DRDVQQIQNI VNERQVQVLV 
VGLPYSMDGS LGFQARQVQK FTSRLAKALQ LPVEYVDERL TSFQAEQMLI AENVSPSRNK
GLIDRKAAAL ILQQWLDIRR TNAQSSVAVE Y