Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3804 |
Symbol | |
ID | 3678774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4738796 |
End bp | 4739251 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637719155 |
Product | Holliday junction resolvase-like protein |
Protein accession | YP_324304 |
Protein GI | 75910008 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0796335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAAAT ACATTTCAGC CTTGGGATTG GATGTGGGGC GTAAGCGCGT TGGTGTGGCT GGATGCGATC GCACTGGGTT GATTGCTACG GGAATCACCA CCGTTGAGCG TACATCTTTT GACCGGGATG TCCAGCAAAT ACAAAATATA GTGAATGAAC GCCAGGTACA AGTTCTGGTT GTAGGTTTGC CATATTCAAT GGATGGTTCC TTAGGATTTC AGGCTCGTCA AGTGCAGAAA TTTACGTCAA GGCTGGCTAA AGCTTTGCAG TTACCTGTGG AATATGTTGA TGAGCGACTG ACTTCTTTTC AAGCTGAACA GATGCTCATC GCTGAAAATG TTTCCCCATC ACGGAATAAA GGTTTAATCG ATCGCAAGGC AGCAGCTTTG ATTTTGCAGC AGTGGTTGGA TATTAGACGA ACTAATGCTC AGAGTTCAGT GGCAGTAGAG TATTGA
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Protein sequence | MTKYISALGL DVGRKRVGVA GCDRTGLIAT GITTVERTSF DRDVQQIQNI VNERQVQVLV VGLPYSMDGS LGFQARQVQK FTSRLAKALQ LPVEYVDERL TSFQAEQMLI AENVSPSRNK GLIDRKAAAL ILQQWLDIRR TNAQSSVAVE Y
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