Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3791 |
Symbol | |
ID | 3678819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4726407 |
End bp | 4727759 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637719142 |
Product | cell wall hydrolase/autolysin |
Protein accession | YP_324291 |
Protein GI | 75909995 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCGTA TTTTTATTTC GGCAGCCCAC GGAGGCAAAG AAGCGGGAGG AGTAGATCCA GGCTCAATTG CTGGGGGGAC GACGGAAGCT AGAGAAATGA TTCTGTTACG AGATTTGATT GTGACAGAAT TGCGATCGCG GAGTTTTGAA GTTTTGTCTG TTCCTGATGA TTTGAGTGCG GCTGATACTA TCACCTGGAT CAATGCTCGT GGTCGTCGAG GTGATGTATC CCTAGAAGTC CATGCTGATT CGGCGAGTAG CCCGGCTGTA CGGGGCGCTA GTGTGTTCTA TATTGCGAGT AATAATGAGC GTAAAAGCAA CGGGGAATTG CTGTTAGTTG GATTGTTACG CCGTGTACCC CAGTTACCAA ATCGGGGAGT TAAGCCAGAT ACAGACAGTG GTTTAGGTAG ATTGGCCTTT TGTCGGCAGA TTGCGATCGC TTCTTTACTC ATGCAGGTGG CTTTTCTCAG CAGTCCTGAG GATCGAGCTT TGCTGCAAAA TCGTCGGCGC GATTTCGCCT TGGGTATTGC TGATGGTTTG GCTTCATGGA GTCGAGTAAT TGACCCTAAC CCTGGAACCC CCGCAGACCC GAATTATCCA CCCATCAATA TTAATATTAA TGGGCAGAAT TATGCAGAGC AAGGAATCTT AGTTAATGGT AATGCTTACA TTCCCATTGA TTTAGTCGAT CGCCTGCGGA TTGATTTATC AAAAGCACCA AATGTCAATC GCCTTACCTA TCGGCGAATT GTCTATGTCA AAGCGGTGGA ACTGCGAGAT TTTAATGTAG CCGTTAGCTG GGATGCAGCA ACACGCACCG TCACCTTACG TTCCAATTTG GTAGTGTGTC CTGGTCAAAT TGACAGGATC ATCTCCAATG GAACTACCTC AGAAGTGCAA ATGCAACTAT TCTTGAGAAA CAATAACGAA AATGCCTTAG CGCAATTTCC TGACTTACCT AAACTCTATC GAGAAGAAGC CAGCGCCGAG GGCGTAAATT ATGACATTGC TTTCTGTCAA ATGTGCGTAG AAACAGGCTT TTTACGCTTT GGTGGAGACA TTAAAGCAGA ACAAAATAAC TTTGCCGGTT TAGGTTCCAT TGGTGGCGGT ACAGAAGCAG CAGCTTTTCC TAGTGCCAGA ATCGGTGTCA GGGCGCACAT CCAGCACCTC AAAGCCTACG CCAGTCTCGA ACCCCTAGTC AATGAAGTAG TAGATCCCCG ATTTCGCTTC GTCACCCGTG GCGTAGCCAC AAAAATTGAT GAACTTTCCG GACGCTGGTC AGCCGATTTA GATTATGGGT CAAAAATCAC CGCTATGGTA AAACGTTTAT ACGAGTCCGC CGGCTTCTTT TAA
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Protein sequence | MGRIFISAAH GGKEAGGVDP GSIAGGTTEA REMILLRDLI VTELRSRSFE VLSVPDDLSA ADTITWINAR GRRGDVSLEV HADSASSPAV RGASVFYIAS NNERKSNGEL LLVGLLRRVP QLPNRGVKPD TDSGLGRLAF CRQIAIASLL MQVAFLSSPE DRALLQNRRR DFALGIADGL ASWSRVIDPN PGTPADPNYP PINININGQN YAEQGILVNG NAYIPIDLVD RLRIDLSKAP NVNRLTYRRI VYVKAVELRD FNVAVSWDAA TRTVTLRSNL VVCPGQIDRI ISNGTTSEVQ MQLFLRNNNE NALAQFPDLP KLYREEASAE GVNYDIAFCQ MCVETGFLRF GGDIKAEQNN FAGLGSIGGG TEAAAFPSAR IGVRAHIQHL KAYASLEPLV NEVVDPRFRF VTRGVATKID ELSGRWSADL DYGSKITAMV KRLYESAGFF
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