Gene Ava_3765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3765 
Symbol 
ID3678969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4685695 
End bp4686777 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content48% 
IMG OID637719115 
Productglycosyl transferase family protein 
Protein accessionYP_324265 
Protein GI75909969 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00610476 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0995629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCT ACAACTCCCT TAGGTCTATA GGCATTGCTG ACCCTAGCGG TTCCGGCTGG 
TTGGCAGTAG TATTCACGTT TATGTTGGCT TGGTTGGTAA CGTGGCGTTT GATTCCCACG
GTACGTAAAT TTGCCTTGCG GGTAGGTTGG GCTGACCAAC CAAACGCCCG ACGACTCAAT
CGAGAACCGT TGCCGAATGC AGGGGGTTTA GCCATTTACG CGGGAGTAAT TGCCGCATTG
GTGTTAGCTA GCCTCTTGCG ACCCATTGAG CTACAAAACG TTTTAGCTCA AGTATTGACT
ATTTTACTAG GGGGTTCGAT CCTAGTCTTG ATCGGCTTTA TTGACGATCA GTTCGGATTA
CCCCCCTCTG TACGGTTGTG GACGCAAATT ATCACAGCTT TATTACTAGT TGCTAATGGC
ATTGTCGTTG ATGTGGATTT CGGCACACCC ATCGACTCCG TTCTCTCAAT GTTGCTGACT
GTGCTGTGGG TTGTGGGTAT TACCAATGCC GTCAACTTGA TGGATGGGAT GGATGGATTG
GCAGGGGGCA TTAGTTTTAT CACTGCCATG AGTTTGTTAG GCGTATCTGC CCAATTCCCT
AATAAGGCTG CGGCTACCTT AGTTTTGGCT GCCTTAGGTG GTGGGGCATT AGGCTTTCTG
CGTCATAACT TCCATCCCTC AAAAATCATC ATGGGTGATG CTGGAGCATA CTTTTTTGGT
TATGTCCTGG CTGCAACTAG TATTTTAGGT AGCCTGCAAA GGAATACTAT ATTTGCTCTT
GGCCCTACCG TTTTGTTTTT GCTGTTGCCA GTACTGGATA CAACCCAAGT GTTTATCAGA
CGGCTGCTAG CAGGTAAAAA CCCCTTGAGT ACCCCCGGCA AAGACCACCT ACACCACCGT
TTACTGGCTT GGGGGTTGTC CCAACGTCAT GCGGCATTTA CCTTGTGGTC AATCACTTTG
GTGTGCAACT TACTAGCCAT GAGAGTCCAA GGGATGAGCA TCATGGTCAT AGTTACCACC
GCCATTAGCA TTATTCTGCT GCTTGGCTTT ACAGTCTGGC AAAGAATCCG TCAGCAGTCC
TGA
 
Protein sequence
MNIYNSLRSI GIADPSGSGW LAVVFTFMLA WLVTWRLIPT VRKFALRVGW ADQPNARRLN 
REPLPNAGGL AIYAGVIAAL VLASLLRPIE LQNVLAQVLT ILLGGSILVL IGFIDDQFGL
PPSVRLWTQI ITALLLVANG IVVDVDFGTP IDSVLSMLLT VLWVVGITNA VNLMDGMDGL
AGGISFITAM SLLGVSAQFP NKAAATLVLA ALGGGALGFL RHNFHPSKII MGDAGAYFFG
YVLAATSILG SLQRNTIFAL GPTVLFLLLP VLDTTQVFIR RLLAGKNPLS TPGKDHLHHR
LLAWGLSQRH AAFTLWSITL VCNLLAMRVQ GMSIMVIVTT AISIILLLGF TVWQRIRQQS