Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3765 |
Symbol | |
ID | 3678969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4685695 |
End bp | 4686777 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637719115 |
Product | glycosyl transferase family protein |
Protein accession | YP_324265 |
Protein GI | 75909969 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00610476 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0995629 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATATCT ACAACTCCCT TAGGTCTATA GGCATTGCTG ACCCTAGCGG TTCCGGCTGG TTGGCAGTAG TATTCACGTT TATGTTGGCT TGGTTGGTAA CGTGGCGTTT GATTCCCACG GTACGTAAAT TTGCCTTGCG GGTAGGTTGG GCTGACCAAC CAAACGCCCG ACGACTCAAT CGAGAACCGT TGCCGAATGC AGGGGGTTTA GCCATTTACG CGGGAGTAAT TGCCGCATTG GTGTTAGCTA GCCTCTTGCG ACCCATTGAG CTACAAAACG TTTTAGCTCA AGTATTGACT ATTTTACTAG GGGGTTCGAT CCTAGTCTTG ATCGGCTTTA TTGACGATCA GTTCGGATTA CCCCCCTCTG TACGGTTGTG GACGCAAATT ATCACAGCTT TATTACTAGT TGCTAATGGC ATTGTCGTTG ATGTGGATTT CGGCACACCC ATCGACTCCG TTCTCTCAAT GTTGCTGACT GTGCTGTGGG TTGTGGGTAT TACCAATGCC GTCAACTTGA TGGATGGGAT GGATGGATTG GCAGGGGGCA TTAGTTTTAT CACTGCCATG AGTTTGTTAG GCGTATCTGC CCAATTCCCT AATAAGGCTG CGGCTACCTT AGTTTTGGCT GCCTTAGGTG GTGGGGCATT AGGCTTTCTG CGTCATAACT TCCATCCCTC AAAAATCATC ATGGGTGATG CTGGAGCATA CTTTTTTGGT TATGTCCTGG CTGCAACTAG TATTTTAGGT AGCCTGCAAA GGAATACTAT ATTTGCTCTT GGCCCTACCG TTTTGTTTTT GCTGTTGCCA GTACTGGATA CAACCCAAGT GTTTATCAGA CGGCTGCTAG CAGGTAAAAA CCCCTTGAGT ACCCCCGGCA AAGACCACCT ACACCACCGT TTACTGGCTT GGGGGTTGTC CCAACGTCAT GCGGCATTTA CCTTGTGGTC AATCACTTTG GTGTGCAACT TACTAGCCAT GAGAGTCCAA GGGATGAGCA TCATGGTCAT AGTTACCACC GCCATTAGCA TTATTCTGCT GCTTGGCTTT ACAGTCTGGC AAAGAATCCG TCAGCAGTCC TGA
|
Protein sequence | MNIYNSLRSI GIADPSGSGW LAVVFTFMLA WLVTWRLIPT VRKFALRVGW ADQPNARRLN REPLPNAGGL AIYAGVIAAL VLASLLRPIE LQNVLAQVLT ILLGGSILVL IGFIDDQFGL PPSVRLWTQI ITALLLVANG IVVDVDFGTP IDSVLSMLLT VLWVVGITNA VNLMDGMDGL AGGISFITAM SLLGVSAQFP NKAAATLVLA ALGGGALGFL RHNFHPSKII MGDAGAYFFG YVLAATSILG SLQRNTIFAL GPTVLFLLLP VLDTTQVFIR RLLAGKNPLS TPGKDHLHHR LLAWGLSQRH AAFTLWSITL VCNLLAMRVQ GMSIMVIVTT AISIILLLGF TVWQRIRQQS
|
| |