Gene Ava_3730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3730 
Symbol 
ID3678934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4640774 
End bp4642057 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content47% 
IMG OID637719080 
Productacetylornithine aminotransferase 
Protein accessionYP_324230 
Protein GI75909934 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID[TIGR00707] acetylornithine and succinylornithine aminotransferases 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000174283 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.451197 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCTAC AAACTCTCAT TGAGCAAGCC ACGAACCCCC CAGAGTCAGG TTCTGCTGCA 
TCTAGCCCCT TTAGTACAGA TAGCTTTGAC GCATCTGTTA TGTCCACATA CGGACGCTTC
CCCCTCGCCT TAGAACGGGG TGCAGGTTGC CGAGTATGGG ATACCCAGGG CAGAGAATAC
CTAGACTTTG TGGCGGGGAT TGCCACTTGT ACACTAGGAC ACGCCCACCC AGCTATGGTA
GAAGCCGTAA CGCGCCAAAT CCAAAAGCTG CACCATGTAT CTAATTTGTA CTACATTCCC
GAACAAGGTG AATTAGCCCA ATGGATTATT CAACACTCCT GCGCTGATCG GGTATTTTTC
TGTAATTCTG GTGCTGAAGC CAACGAAGCC GCTATTAAAC TGGCTCGTAA ATATGCCCAC
ACAGTTTTAG ACATAGAAAA GCCTATTATT CTCACCGCCA ATGCCAGTTT CCACGGACGG
ACGTTGGCAA CTATTACCGC TACTGGGCAA GCAAAGTATC AAAAATATTT TGATCCCCTG
GTACCCGGAT TTCACTATGT AAATTACAAC GATATCAGTG CGGTAGAAGC AGCTATTAGT
GAGTTAGATG AGGGAGATTA CCGAGTAGCG GCAATTCTCA TTGAACCTTT ACAAGGGGAA
GGCGGTGTTC GTCCTGGTGA TGTGGAATAC TTCCAAAAGC TGCGGCAAAT TTGTGATGAC
ACTGGCATTT TATTGATGTT CGATGAAGTG CAAGTTGGTA TGGGACGCAG TGGTAAATTG
TGGGGTTATG AATACCTGGG TGTAGAACCA GATATTTTCA CCAGCGCCAA AGGTTTGGGT
GGTGGTATCC CCATTGGGGC AATGATGAGT AAGAAATTCT GCGATGTCTT CCAACCAGGA
GAACACGCCA GCACTTTTGG TGGTAATCCC TTTGCCTGTG GTGTAGCGTT GGCTGTGTGC
CAAACCTTGG AAAGGGAGAA TATTTTGCAG AATGTGGAAG ATAGAGGAGA ACAATTAAGG
GCAGGCTTAA GAGCGCTCGC TGCTAAATAT CCCCATCATC TTACAGAAGT TCGCGGTTGG
GGTTTAATTA ACGGTTTGGA ATTAGCCGCA GATATTCAAT TAACTGCTGC TGATGTCGTC
AAAGCTGCCA TCAACGAAGG CTTACTGTTA GTACCAGCCG GGCCCAAAGT CGTCCGTTTT
GTACCACCAT TAATTGTGAC AGAGGCAGAA ATCAACACCG CCTTAAAGTT ACTAGAAAAA
GCATTAGCAA CTGTGACAGC TTAA
 
Protein sequence
MSLQTLIEQA TNPPESGSAA SSPFSTDSFD ASVMSTYGRF PLALERGAGC RVWDTQGREY 
LDFVAGIATC TLGHAHPAMV EAVTRQIQKL HHVSNLYYIP EQGELAQWII QHSCADRVFF
CNSGAEANEA AIKLARKYAH TVLDIEKPII LTANASFHGR TLATITATGQ AKYQKYFDPL
VPGFHYVNYN DISAVEAAIS ELDEGDYRVA AILIEPLQGE GGVRPGDVEY FQKLRQICDD
TGILLMFDEV QVGMGRSGKL WGYEYLGVEP DIFTSAKGLG GGIPIGAMMS KKFCDVFQPG
EHASTFGGNP FACGVALAVC QTLERENILQ NVEDRGEQLR AGLRALAAKY PHHLTEVRGW
GLINGLELAA DIQLTAADVV KAAINEGLLL VPAGPKVVRF VPPLIVTEAE INTALKLLEK
ALATVTA