Gene Ava_3676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3676 
Symbol 
ID3679232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4582820 
End bp4583647 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content43% 
IMG OID637719027 
Productmethionine aminopeptidase 
Protein accessionYP_324177 
Protein GI75909881 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTC TCACCAACTT GCTTTCTCAA ACACCTAAGC CATCACCTGC CAAAAAACAA 
CGCCGGGGTA TTGAAATTAA ATCACCCCGC GAAATTGATA TTATGCGAGA GTCGGCGAAA
ATTGTCGCCA CCGTACTTAA AGAGATTTCC GGGCTGGTAA AACCAGGAAT GACGACGGCT
GACTTGGATG CTTATGCGGA AAAACGTATC CGTGAAATGG GTGCAACACC AAGTTTTAAG
GGCTATCACG GCTTTACCGG TTCTATCTGC TCTAGTATTA ATAACGAAGT TGTACATGGT
ATTCCCAGCC ATAAGAAAGT AATTCGGACT GGCGATGTAC TAAAAGTAGA CACAGGTGCT
TATTTTCAAG GCTTTCATGG TGATTCCTGT ATTACGATCG CTGTTGGTGA AGTAACTCCA
GATGCCGCTA AACTGATTCG CGTAGCTGAA GAGGCGCTAT ATAAGGGCAT TGAACAAGTT
AAAGCAGGTG CATACCTCCT TGATTTAGCT GGGGCAATTG AGGATCATGT GAAAGTTAAT
GGCTTTACTG TGGTAGAAGA ATTCACAGGA CACGGTGTGG GAAGGAACCT ACATGAAGAA
CCTTCTGTGT TTAACTACCG CACTAGAGAA ATGCCCAATG TGAAACTGCG TGCAGGAATG
ACATTGGCAA TTGAACCCAT TTTAAATGCA GGTTCTAAAC ACACCCGGAC TTTATCCGAT
CGCTGGACGG CTGTAACTGT AGATAATTCT CTATCCGCCC AATTTGAACA TACAGTTTTA
GTCACAGAAA CCGGTTACGA AATTTTAACC GATCGCACCA AGGTTTAA
 
Protein sequence
MNILTNLLSQ TPKPSPAKKQ RRGIEIKSPR EIDIMRESAK IVATVLKEIS GLVKPGMTTA 
DLDAYAEKRI REMGATPSFK GYHGFTGSIC SSINNEVVHG IPSHKKVIRT GDVLKVDTGA
YFQGFHGDSC ITIAVGEVTP DAAKLIRVAE EALYKGIEQV KAGAYLLDLA GAIEDHVKVN
GFTVVEEFTG HGVGRNLHEE PSVFNYRTRE MPNVKLRAGM TLAIEPILNA GSKHTRTLSD
RWTAVTVDNS LSAQFEHTVL VTETGYEILT DRTKV