Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3657 |
Symbol | |
ID | 3679252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4562805 |
End bp | 4563389 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637719008 |
Product | pentapeptide repeat-containing protein |
Protein accession | YP_324158 |
Protein GI | 75909862 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATCGA AATTAAGTAA ATTAAGCGAT CGTATATTGC ATTACCTAGC CGACTTAACC AAAACTCTAC TCGGTCTAGA CCAGAAAAAA TTTCAACAAC TCAGCCTCAG CATACTTAGC TTATTACTTT GGGGACTATT CGGCATAATC ACAATTGTCG GTTGCACACC CCCAGCTTTT GCACTGGAGT ACAACAAAGA AATTTTAGTG GAAGCAGATT TTTCAGGACG AGATTTAACA GACTCTAGTT TCACCAAAGC TAACTTGCGT CAGAGTAACT TTAGTAAATC TAATTTAACT GGTGTTAGCT TCTTCGCCGC CAATTTAGAG TCAGCTAATT TAGAAGGAAC AAACCTGACA AACGCCACCT TAGACTCAGC TCGTCTCATC AAAGCCAACT TAACAAATGC AGTATTAGAA GGAGCCTTCG CCGCCAGCAC CAAATTTGAT GGAGCCATCA TTGACGGTGC AGACTTCACC GATGTACTCT TACGCCCAGA TGAGCAGAAA AAATTATGTA AAGTTGCCAA AGGCACCAAT CCCACTACGG GAAGAGAAAC CCGCGACACA TTATTCTGTC CCTAA
|
Protein sequence | MKSKLSKLSD RILHYLADLT KTLLGLDQKK FQQLSLSILS LLLWGLFGII TIVGCTPPAF ALEYNKEILV EADFSGRDLT DSSFTKANLR QSNFSKSNLT GVSFFAANLE SANLEGTNLT NATLDSARLI KANLTNAVLE GAFAASTKFD GAIIDGADFT DVLLRPDEQK KLCKVAKGTN PTTGRETRDT LFCP
|
| |