Gene Ava_3657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3657 
Symbol 
ID3679252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4562805 
End bp4563389 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content42% 
IMG OID637719008 
Productpentapeptide repeat-containing protein 
Protein accessionYP_324158 
Protein GI75909862 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCGA AATTAAGTAA ATTAAGCGAT CGTATATTGC ATTACCTAGC CGACTTAACC 
AAAACTCTAC TCGGTCTAGA CCAGAAAAAA TTTCAACAAC TCAGCCTCAG CATACTTAGC
TTATTACTTT GGGGACTATT CGGCATAATC ACAATTGTCG GTTGCACACC CCCAGCTTTT
GCACTGGAGT ACAACAAAGA AATTTTAGTG GAAGCAGATT TTTCAGGACG AGATTTAACA
GACTCTAGTT TCACCAAAGC TAACTTGCGT CAGAGTAACT TTAGTAAATC TAATTTAACT
GGTGTTAGCT TCTTCGCCGC CAATTTAGAG TCAGCTAATT TAGAAGGAAC AAACCTGACA
AACGCCACCT TAGACTCAGC TCGTCTCATC AAAGCCAACT TAACAAATGC AGTATTAGAA
GGAGCCTTCG CCGCCAGCAC CAAATTTGAT GGAGCCATCA TTGACGGTGC AGACTTCACC
GATGTACTCT TACGCCCAGA TGAGCAGAAA AAATTATGTA AAGTTGCCAA AGGCACCAAT
CCCACTACGG GAAGAGAAAC CCGCGACACA TTATTCTGTC CCTAA
 
Protein sequence
MKSKLSKLSD RILHYLADLT KTLLGLDQKK FQQLSLSILS LLLWGLFGII TIVGCTPPAF 
ALEYNKEILV EADFSGRDLT DSSFTKANLR QSNFSKSNLT GVSFFAANLE SANLEGTNLT
NATLDSARLI KANLTNAVLE GAFAASTKFD GAIIDGADFT DVLLRPDEQK KLCKVAKGTN
PTTGRETRDT LFCP