Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3644 |
Symbol | |
ID | 3679239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4547424 |
End bp | 4548446 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637718995 |
Product | curli production assembly/transport component CsgG |
Protein accession | YP_324145 |
Protein GI | 75909849 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1462] Uncharacterized protein involved in formation of curli polymers |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.8014 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCACA GCAAATTATC TCAAAATAAG TCTATAATCT TGGGCTTATG TTTACCAGCG ATCGCTGCAT ATTTCACCCT AAAGACCGGA ACCTTTTCTC TACAACCAGC TAACGCCAAA CAAACACAAT CTTTCCAACT AGCACAACAA AGCAGTTCCC CATCCGAAAA AGTCAGAATT GCCATTCTCG ATTTTGATTT TAGTAGCGTC AGCAACCCCA GTTACCTATC ACTTTTTCCC GCAGGTAGTA AGGGTGTCAG TGACATCCTT GTAAATAGGT TAGTGAAAAG CGGTAATTTT GTTGTCGTGG AACGTAGCCA ATTAGAAGCT ATTTTAAGAG AACAAGATTT AGGTGATTCT GGGCGAGTTG ATGCTAGTAC AGCCGCAAAA ATTGGCCGCA TTTTAGGCGT TGAGGCGGTT GTCATCGGCT CAGTTACTCA ATTCGACGTT CAACAACGGC GTTCTGGAGG CGGCTTTTTA GGATTTGGTG CAGCAAGTAC CGATACTGAT GCTTTAGTCA AGTTGAATAT TCGCGTAGTC AATACAACTA CAGCCGAAAT ATTATTTGTA GCTGAAGGTA ATGGGAATGA GAGTCAGTCA GACACTCAAG TCAGCGTACT GGGTATTGGT GGAGGTTCCT CTACTAGTAA TGAAGGCAAA TTACTCACCA AAGCCACGGA AAAAGCGATC GATCAAGTCA TCACTGAATT AAATACAAAA TCAACCAATT TAGCCGCTTT ACCAAAAGCT TTACCCAGTG TTAACGCAAC TGTAGCCGAT GTCACAGGAA ATACTGTGAT TTTAAACAAA GGTCAATCAG ACGGTTATCG AGTCGGGATG AAACTTTCCA TTGAGCGAGT GACAAAACAA GTGAAAGACC CGACCACAGG TAAAGTTATA CGCAGTGTTA CTCAACCATT AGGCATGATT CAACTAGTTG ATGTGGATGC TACGTCTAGC GTTGGGAAAA TCACTACTGG CGGTAAATTC AAAGTAGGCG ATATTGCTAA ACCTGCACAA TAG
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Protein sequence | MNHSKLSQNK SIILGLCLPA IAAYFTLKTG TFSLQPANAK QTQSFQLAQQ SSSPSEKVRI AILDFDFSSV SNPSYLSLFP AGSKGVSDIL VNRLVKSGNF VVVERSQLEA ILREQDLGDS GRVDASTAAK IGRILGVEAV VIGSVTQFDV QQRRSGGGFL GFGAASTDTD ALVKLNIRVV NTTTAEILFV AEGNGNESQS DTQVSVLGIG GGSSTSNEGK LLTKATEKAI DQVITELNTK STNLAALPKA LPSVNATVAD VTGNTVILNK GQSDGYRVGM KLSIERVTKQ VKDPTTGKVI RSVTQPLGMI QLVDVDATSS VGKITTGGKF KVGDIAKPAQ
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