Gene Ava_3644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3644 
Symbol 
ID3679239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4547424 
End bp4548446 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content42% 
IMG OID637718995 
Productcurli production assembly/transport component CsgG 
Protein accessionYP_324145 
Protein GI75909849 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1462] Uncharacterized protein involved in formation of curli polymers 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.8014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCACA GCAAATTATC TCAAAATAAG TCTATAATCT TGGGCTTATG TTTACCAGCG 
ATCGCTGCAT ATTTCACCCT AAAGACCGGA ACCTTTTCTC TACAACCAGC TAACGCCAAA
CAAACACAAT CTTTCCAACT AGCACAACAA AGCAGTTCCC CATCCGAAAA AGTCAGAATT
GCCATTCTCG ATTTTGATTT TAGTAGCGTC AGCAACCCCA GTTACCTATC ACTTTTTCCC
GCAGGTAGTA AGGGTGTCAG TGACATCCTT GTAAATAGGT TAGTGAAAAG CGGTAATTTT
GTTGTCGTGG AACGTAGCCA ATTAGAAGCT ATTTTAAGAG AACAAGATTT AGGTGATTCT
GGGCGAGTTG ATGCTAGTAC AGCCGCAAAA ATTGGCCGCA TTTTAGGCGT TGAGGCGGTT
GTCATCGGCT CAGTTACTCA ATTCGACGTT CAACAACGGC GTTCTGGAGG CGGCTTTTTA
GGATTTGGTG CAGCAAGTAC CGATACTGAT GCTTTAGTCA AGTTGAATAT TCGCGTAGTC
AATACAACTA CAGCCGAAAT ATTATTTGTA GCTGAAGGTA ATGGGAATGA GAGTCAGTCA
GACACTCAAG TCAGCGTACT GGGTATTGGT GGAGGTTCCT CTACTAGTAA TGAAGGCAAA
TTACTCACCA AAGCCACGGA AAAAGCGATC GATCAAGTCA TCACTGAATT AAATACAAAA
TCAACCAATT TAGCCGCTTT ACCAAAAGCT TTACCCAGTG TTAACGCAAC TGTAGCCGAT
GTCACAGGAA ATACTGTGAT TTTAAACAAA GGTCAATCAG ACGGTTATCG AGTCGGGATG
AAACTTTCCA TTGAGCGAGT GACAAAACAA GTGAAAGACC CGACCACAGG TAAAGTTATA
CGCAGTGTTA CTCAACCATT AGGCATGATT CAACTAGTTG ATGTGGATGC TACGTCTAGC
GTTGGGAAAA TCACTACTGG CGGTAAATTC AAAGTAGGCG ATATTGCTAA ACCTGCACAA
TAG
 
Protein sequence
MNHSKLSQNK SIILGLCLPA IAAYFTLKTG TFSLQPANAK QTQSFQLAQQ SSSPSEKVRI 
AILDFDFSSV SNPSYLSLFP AGSKGVSDIL VNRLVKSGNF VVVERSQLEA ILREQDLGDS
GRVDASTAAK IGRILGVEAV VIGSVTQFDV QQRRSGGGFL GFGAASTDTD ALVKLNIRVV
NTTTAEILFV AEGNGNESQS DTQVSVLGIG GGSSTSNEGK LLTKATEKAI DQVITELNTK
STNLAALPKA LPSVNATVAD VTGNTVILNK GQSDGYRVGM KLSIERVTKQ VKDPTTGKVI
RSVTQPLGMI QLVDVDATSS VGKITTGGKF KVGDIAKPAQ