Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3640 |
Symbol | |
ID | 3679235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4539124 |
End bp | 4540428 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637718991 |
Product | heterocyst specific ABC-transporter, membrane fusion protein DevB |
Protein accession | YP_324141 |
Protein GI | 75909845 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR02971] ABC exporter membrane fusion protein, DevB family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.800892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.900704 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAAA AACTGTTATT TAAGCCTGCC AATCAAGGGG TAATTGCATT AGTAATTGCA GCTACCGCCG TTACATCGGG AATTGTGTTG TATGCAGTTA GTCAGTTTGG GCAAGTAGGT AAAACCAGTG CATCCGATGC TGTAGTAACT GAGGCGATCG CTCCCAAGAT AACTGCTTTG GGTAGACTAG AGCCAGAAAC AGAAGTGATC AGCTTATCTG CACCATTGGC TTTAGATGGC GATCGCGTCG CCCAAATCCT AGTGGAAGAA GGTGACGAAG TGCAAGCTGG ACAAGTAGTA GCAATTTTAG ACTCCCGCGC CCGCTTGCAA ACCGCCGTAC TCCAAGCCGA AAAACAAATA CGCGTTGCCC AAGCCAAACT CAATCAAGTC AAGGCTGGAG CCAAAACTGG CGATATCCGC GCCCAGCAAG CTAGCGTGGA ACGCTTACAA GCCCAATCCC AAGGCGATAG AACAGGACAA CAACAAACCA TTGCGCGGAT AGAAGCGCAA TGGCAAGGTG ACAGAATCGC CCAAGAAGCC ACAATTAGGA AGCTAGAGGC AGAACTGAAA AATGCCGAAG CCGAATATCA ACGCTATCAG CAGCTTTACT CAGAAGGGGC AATTTCTAGT TCAGCAATTG ATACCAGACG CTTGAGTGTG GAAACTGCCA AAGAGCAACT AGACGAAGCC AAAGCAGTGC TGAACCGAAT TAACTCCACT GCTAGCAAAG AACTAGCGGA AGCCAAAGTT GCACTGAACC GGATTAACGC CACCAGTAAC AAGCAAATTA GCGAAGCCAA AGCCACACTC ACCAGTATTG CCGAAGTTAG ACCAGTGGAT GTGCAAGCAG CACAAACAGA AGTTGAAGAT GCGATCGCTT CCCTAAAACG CGCCACAACC GATTTAGAAG CAGCTTATAT CAGAGCGCCA CAAGCGGGAC AGATTCTCAA AATTCATACC CGTGTCGGCG AAAAAATCAG TGAAAATGGC ATTGCTGACC TAGCACAAAC TAACCAAATG TTAGCTGTTG CCGAAGTCTA TCAAACCGAT ATCGGTAAAG TGAAACTGGG ACAGCAAGCA GCCATTACCA GTCAAGCCTT TGGTGGCGAA TTGCGAGGAA AAGTTTCTCA AATCGGCTTG CAGGTACGAC GACAAAACGT ATTTAGCAAC CAGCCAGGAG AAAACCTCGA TAGCCGAGTT GTTGAAGTCA AAATTCGCCT CAACCCTGAA GACAGCAAAA AAGTTGCAGG TTTCACAAAC TTGCAAGTAC AAGCAGCAAT TGAAACGATT CAAAATTCAA AATGA
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Protein sequence | MSQKLLFKPA NQGVIALVIA ATAVTSGIVL YAVSQFGQVG KTSASDAVVT EAIAPKITAL GRLEPETEVI SLSAPLALDG DRVAQILVEE GDEVQAGQVV AILDSRARLQ TAVLQAEKQI RVAQAKLNQV KAGAKTGDIR AQQASVERLQ AQSQGDRTGQ QQTIARIEAQ WQGDRIAQEA TIRKLEAELK NAEAEYQRYQ QLYSEGAISS SAIDTRRLSV ETAKEQLDEA KAVLNRINST ASKELAEAKV ALNRINATSN KQISEAKATL TSIAEVRPVD VQAAQTEVED AIASLKRATT DLEAAYIRAP QAGQILKIHT RVGEKISENG IADLAQTNQM LAVAEVYQTD IGKVKLGQQA AITSQAFGGE LRGKVSQIGL QVRRQNVFSN QPGENLDSRV VEVKIRLNPE DSKKVAGFTN LQVQAAIETI QNSK
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