Gene Ava_3616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3616 
Symbol 
ID3679308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4510380 
End bp4511561 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content43% 
IMG OID637718967 
Productresponse regulator receiver Signal transduction histidine kinase 
Protein accessionYP_324117 
Protein GI75909821 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.159723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.789101 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTAC CAACTGCTCA ATCTGGAAAA ATTCTGGTGG TTGATGATTC TCCAGATAAC 
GTGTTTTTGA TTAAAACCAT TCTGGAGGAA GAAGGTTATA CAGTTAGTAC CGCCGAAAAT
GGCATCTCAG CATTAGCAGA ACTGCAAGCA TCCCCTTGTG ATTTGGTGCT GTTGGATTTA
ATGATGCCAG GGATGGATGG TTATGAAGTT ACTAGGCGGG TGCGTGGGGA GATGAAGTTG
CAGCAATACA TCCCCATCTT GCTGATTACC GCCCACGATG CCCCAAATGT AGCGCATGGA
TTAGATTTGG GTGCTGATGA TTTTATCCGC AAACCCGTCA CAGTGGATGA ATTACTGGCA
AGAGTGCGAT CGCTTCTTCG TTTGAAGCAT AGTATGGATG AACGCGATGA AATAGCTCGT
CAGCGCGAAG ATTTCGTCTC TCGTCTCACC CACGATTTAC GCACTCCCTT AGTGGCGGCT
GATCGGATGT TGGCACTATT TCAACAAGGT GCTTTGGGAA ATTTATCACC GCAAATGCAG
GAAGTAATCA CCATCATGGC GCGGAGTAAT ATTAACCTGC TGTCAATGGT GAATACTTTA
TTAGAAGTTT ATCGCTTTGA AGCTGGTCGC AAAACCTTAG CATTTCAACC AGTAAATCTC
AGTCAATTAT TAAATGAGGT GATTGCAGAA CTGACACCCT TGGCTCAAGA AAAAAACTTG
GCAATTAATA GCGATTTTGG CGACACATCA ACACCAAATA AACTAGGCGA TGGCATTCCG
CCCACCGTAG GCGATCGCTT AGAATTGCAT CGCTTATTTA CCAACCTTAT AGGTAACGCC
ATCAAATTTA CAGCCTCTGG CTCAGTGACT ATTCGCCTCA AAGGCATTAT ATTAAATGCT
AAACAAGATT TTTCCGACCC TTCCTTACTT TCTAGCAACA TCGACTATGT ACAGGTTGAA
ATCGCAGATA CAGGCGCAGG TATTCCATTA GAAGAACACG CCACATTATT TGAAAGATTT
CGTCAAGGTA GTCATAAAAT TTCTGGTAGT GGTCTAGGCT TGTATCTTTC TCGGCGCATT
GTTGAGGCTC ATCACGGTAA AATAGTGGTT AATTCAGAGT TAGGCAAAGG CAGTGTTTTT
GTCGTTAGTT TACCTATTCA AATAGTAGGT AAAGCAGACT AG
 
Protein sequence
MSLPTAQSGK ILVVDDSPDN VFLIKTILEE EGYTVSTAEN GISALAELQA SPCDLVLLDL 
MMPGMDGYEV TRRVRGEMKL QQYIPILLIT AHDAPNVAHG LDLGADDFIR KPVTVDELLA
RVRSLLRLKH SMDERDEIAR QREDFVSRLT HDLRTPLVAA DRMLALFQQG ALGNLSPQMQ
EVITIMARSN INLLSMVNTL LEVYRFEAGR KTLAFQPVNL SQLLNEVIAE LTPLAQEKNL
AINSDFGDTS TPNKLGDGIP PTVGDRLELH RLFTNLIGNA IKFTASGSVT IRLKGIILNA
KQDFSDPSLL SSNIDYVQVE IADTGAGIPL EEHATLFERF RQGSHKISGS GLGLYLSRRI
VEAHHGKIVV NSELGKGSVF VVSLPIQIVG KAD