Gene Ava_3609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3609 
Symbol 
ID3679301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4502851 
End bp4504053 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content40% 
IMG OID637718960 
Productarsenical pump membrane protein 
Protein accessionYP_324110 
Protein GI75909814 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1055] Na+/H+ antiporter NhaD and related arsenite permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCTCA TCCAATTTGC CATTTATGGC GTAATAGGGC TGACATACCT GGGTTTAGCC 
TTGGGCTACA TTCCAGGCTT ACGGATGAAC CGCGCCACCA TTGCCTTAGT TGGCTCTACC
TTTTTAATTG CCTTTGGTGT ACTGAATTTA CAGGAAGCTT GGCAGGCAAT TGACCCAAAT
ACCATCGTAT TTCTTTTAAG TATGATGGTA GTCAACGCCA ACTTATCCTA TGCAGGGTTT
TTCCGACGTG CTTTAGCTGT GTTGTTGAGT TTTACCCGTA GTCCTTTAGG TTTGTTGATT
GCTTTAACCT TTGGTAGCGG TATTCTCTCC GCCTTTTTCC TGAATGATAC TTTGGCGCTA
GTCTTCACGC CTTTGACTTT GAGTCTGGCT CAAGCCTTGA GTTTAAATCC AATTCCCTAT
TTACTAGCGA TCGCCGGAGC AACTAATATA GGCTCTGTGG CTACCCTAAG CGGTAATCCC
CAAAATATCT TGATAGGATC TTTTTCTGGG ATTCCCTACC TAGAATTTTT GCGTATCTTA
GCTCCCGTTG CTTTTATCGG CTTAATAATT CAGGTAGGAT TACTGTGGCT ACTTTACCCA
GATGTGCGTT CAGCTAAACC TTGCCAAGTT GTAGCCATCA ACAACCAACG AATATTTAAA
CCCTTATTTA ATAAAACATT AGTTATTACT ACAGGCTTAC TTATTGCTTT TACTATCGGC
TTACCTTTAG CACAGTCAGC CCTCGTTGCA GCTAGTTTAC TTTTAATTAC TAGAAGAATT
AAACCACAAC GAGTTTTAAA AAAGGTAGAT TGGAATCTTT TGGTGATGTT TTCGGGACTG
TTTATTTTGA CGAAAGCCAC CCAAAAATTG AATTTATTAC AGCCATTTAC CCATGTCATC
AACTCTGCTG CAAGTTTATT GGGTGTGACA GTTGTTTTAT CTAACTTGAT TTCTAATGTT
CCGGCTGTGC TGCTATTGCA ACCGTTAATT TCCCCAGATG ATACCAAATC TTGGCTATTA
CTAGCAGCAG GTTCAACTCT AGCAGGTAAT TTAACTTTAT TTGGTGCAGT TGCCAATCTC
ATTACTGTAG AAGCTGCTGC CGATTTAGGT TACAAGCTTA CATTTTTAGA GCATTTACGT
TTTGGCTTAC CACTAACAAT ATGCACTTTA ATAATTACCT ATCTGTGGGT TAACTTAGGT
TGA
 
Protein sequence
MILIQFAIYG VIGLTYLGLA LGYIPGLRMN RATIALVGST FLIAFGVLNL QEAWQAIDPN 
TIVFLLSMMV VNANLSYAGF FRRALAVLLS FTRSPLGLLI ALTFGSGILS AFFLNDTLAL
VFTPLTLSLA QALSLNPIPY LLAIAGATNI GSVATLSGNP QNILIGSFSG IPYLEFLRIL
APVAFIGLII QVGLLWLLYP DVRSAKPCQV VAINNQRIFK PLFNKTLVIT TGLLIAFTIG
LPLAQSALVA ASLLLITRRI KPQRVLKKVD WNLLVMFSGL FILTKATQKL NLLQPFTHVI
NSAASLLGVT VVLSNLISNV PAVLLLQPLI SPDDTKSWLL LAAGSTLAGN LTLFGAVANL
ITVEAAADLG YKLTFLEHLR FGLPLTICTL IITYLWVNLG