| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3608 |
|---|
| Symbol | |
|---|
| ID | 3679300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 4500796 |
|---|
| End bp | 4502565 |
|---|
| Gene Length | 1770 bp |
|---|
| Protein Length | 589 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637718959 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_324109 |
|---|
| Protein GI | 75909813 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
|---|
| TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAA ACGAAACTAA TGCTGGCCTA AAAATTATTC CCTTAGGCGG TTTACATGAA
ATTGGTAAAA ACACCTGTGT TTTTGAATAT GATGATGAAA TCATTCTTTT AGATGCAGGG
TTGGCTTTCC CCACAGAGGC GATGCACGGG GTAAATATCG TCCTGCCAGA TATGACCTAT
CTACGGGAAA ATCGCCACAA AATCAAAGGT ATGGTTGTTA CCCACGGCCA TGAAGATCAT
ATTGGTGGGA TTGCTTTTCA CCTCAAACAA TTTGACATTC CAGTAATTTA TGGGCCTAGA
CTAGCAATGG CAATGCTAGA GGGTAAATTA GAAGAAGCTG GAGTACGCGA TCGCACAGAA
TTAAGAAAAG TTTTACCCCG TGATGTTGTA CGCATTGGTA AATCATTTTT TGTCGAGTAC
ATCCGCAACA CCCACTCCAT TGCTGATAGC TTCACCGTTG CCATTCACAC CCCCTTAGGT
GTGGTGATTC ACACGGGAGA CTTCAAATTT GACCACACCC CAGTTGATGG TGAAAAATTT
GACCTGCAAC GCCTGGCAGA ACACGGCGAA AAAGGCGTAC TTTGTCTGTT GAGTGATTCC
ACTAACTCGG AAGTCCCAGG CTTCACCCCT TCAGAAGCAT CAGTTTTTCC CAATCTAGAT
AGAGTTTTTA GTCAAGCGGA AGGACGGCTA TTCGTCACCA CCTTTGCTTC CAGCGTCCAT
CGCATCAACA TGATTTTGCA ACTGGCGAAA AAGCATAACC GCGTTGTCAC AGTTGTTGGG
CGTTCCATGC TGAACTTGAT TGCCCACGCC CGTAATTTGG GTTACATCAA GTGTGAAGAT
AATCTGTTGC AGCCCTTGCA CATGGTACGT AATCTGCCAG ACGATAATGT TCTGGTTCTC
ACCACTGGTT CTCAAGGTGA AACAATGGCA GCCATGACCA GGATTGCCAA CAAAGAACAC
CCCCATATTA AAATCCGTCA AGGCGATACT GTTGTCTTCT CTGCTAACCC AATTCCGGGG
AACACAATTG CTGTAGTCAA TACCATCGAC AAATTGATGC AGCAAGGGGC GAAAGTAGTT
TATGGAAGAG ACCAAGGGAT TCACGTTTCG GGTCACGGCT GTCAAGAAGA CCAAAAGCTG
ATGATTGCCT TAACTCGACC CAAGTTCTTT GTTCCAGTCC ACGGTGAACA TCGGATGTTG
GTGAAACATT CCCAAACCGC CCAGAAGTCA GGCATTCCCG CCGAGAATAT GGTGATTATT
CAAAATGGGG ATATCATCGA ACTGACGGAA GACTCAATTC GTGTCGCGGG GAAAGTTCAA
TCTGGTATCG AGTTAGTCGA TACTACAAGC TCTGGAATGG TCAGCGCCAA AGTACTGCAA
GAACGTCAAC GCATGGCAGA GGAAGGACTG GTGACTATTG CAGCTGCTAT TGATTGGCAA
GGTAAATTGT TGGCTAAACC AGAAATTCAC CTGCGTGGTG TTGTTACTAG TGTAGAGCGA
TCGCTGTTAC AAAAGTGGGT ACAACAGCGT ATTGAAGAAA TTTTGAGCGT GCGTTGGTCA
GAGTTTGCGA CTTCTGAAGG TGAACAGCCT GAGATTGATT GGGGTGGTTT GCAAGGAACT
TTAGAACGGG AGTTGCAACG TTCTATTCGT CGTGAGTTGC AATGTCAGCC ATCGGTTACT
TTGCTGATGC AAATTCCTGA TGAGCCACCT GTGAAGGTTG CTGATGGTAG AAGGCGGCGG
ACTCGCACGG CTGCTCAAGT AGCTTCTTAG
|
|---|
| Protein sequence | MAKNETNAGL KIIPLGGLHE IGKNTCVFEY DDEIILLDAG LAFPTEAMHG VNIVLPDMTY
LRENRHKIKG MVVTHGHEDH IGGIAFHLKQ FDIPVIYGPR LAMAMLEGKL EEAGVRDRTE
LRKVLPRDVV RIGKSFFVEY IRNTHSIADS FTVAIHTPLG VVIHTGDFKF DHTPVDGEKF
DLQRLAEHGE KGVLCLLSDS TNSEVPGFTP SEASVFPNLD RVFSQAEGRL FVTTFASSVH
RINMILQLAK KHNRVVTVVG RSMLNLIAHA RNLGYIKCED NLLQPLHMVR NLPDDNVLVL
TTGSQGETMA AMTRIANKEH PHIKIRQGDT VVFSANPIPG NTIAVVNTID KLMQQGAKVV
YGRDQGIHVS GHGCQEDQKL MIALTRPKFF VPVHGEHRML VKHSQTAQKS GIPAENMVII
QNGDIIELTE DSIRVAGKVQ SGIELVDTTS SGMVSAKVLQ ERQRMAEEGL VTIAAAIDWQ
GKLLAKPEIH LRGVVTSVER SLLQKWVQQR IEEILSVRWS EFATSEGEQP EIDWGGLQGT
LERELQRSIR RELQCQPSVT LLMQIPDEPP VKVADGRRRR TRTAAQVAS
|
|---|
| |