Gene Ava_3590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3590 
Symbol 
ID3679360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4471598 
End bp4472410 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content43% 
IMG OID637718941 
ProductHAD family hydrolase 
Protein accessionYP_324091 
Protein GI75909795 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.684772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0477257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACATAA ATCCCCATGT TGGTGCTGGG CATTCTCCAA ATCTGCAAAG AATTTCCCAA 
AATACTGTGG CTGAATTGAG CCATGTCCGC CTCATTGCCA CAGATATGGA TGGTACTCTG
ACTCAGCAAG GAAGATTTTC TGCGGCTTTG TTGCAAACCC TAGAAGATTT AAAGGCTGGG
GGGTTGACGG TATTGATTGT TACCGGACGT TCAGCCGGTT GGATGAGTGG AATTAGTAGC
TTAATGCCAG TTGCGGGGGC AATAGGGGAA AATGGGGGTT TGTTCTATCC TGCGGAAAGT
GAGCATCCCT TACTATTAAC ACCCATTGCC GATGTAACTG AACATAGACA GAACTTAGCT
TTGGTTTTTC AAGAATTAAA ACTGAAATTT CCCCAAATTG AAGAATCAGG GGATAATCGC
TTTCGCGTTA CCGATTGGAC ATTTGATGTA GCTGGCTTGA CTTTAGAGGA ACTAAAAATT
ATAGCCAATC TCTGTCAAGA TATGGGTTGG GGATTTACTT ACAGCAACGT CCAGTGTCAT
ATCAAACCAC AAGGACAAGA AAAAGCGATC GCCTTATTAC AAGTTTTACA AAAATATTTT
CCCGATTATT CCCCGACTCA GGTTGTAACT GTTGGTGATA GCCCTAACGA TGAAAGTTTA
TTTAATCAGC GTTATTTCCC CCTTTCTGTC GGTGTGGCGA ATGTGTTGAA ATATGCAGAC
CAGTTGCAGC ATCAACCCAG TTACGTCACC ACTGCGGCTG AGGGGGAAGG ATTTTGTGAG
TTATCTAGTT ATATTTTGAG GAAGGGCAAC TAA
 
Protein sequence
MYINPHVGAG HSPNLQRISQ NTVAELSHVR LIATDMDGTL TQQGRFSAAL LQTLEDLKAG 
GLTVLIVTGR SAGWMSGISS LMPVAGAIGE NGGLFYPAES EHPLLLTPIA DVTEHRQNLA
LVFQELKLKF PQIEESGDNR FRVTDWTFDV AGLTLEELKI IANLCQDMGW GFTYSNVQCH
IKPQGQEKAI ALLQVLQKYF PDYSPTQVVT VGDSPNDESL FNQRYFPLSV GVANVLKYAD
QLQHQPSYVT TAAEGEGFCE LSSYILRKGN