Gene Ava_3540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3540 
Symbol 
ID3679564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4407112 
End bp4408500 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content46% 
IMG OID637718892 
Producthypothetical protein 
Protein accessionYP_324042 
Protein GI75909746 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTATGT TACAAGAAGT TAGCACCCAT CTCATTATTC CAGAACCCTC AGAAGACCTG 
ATCGTTAACG AGCCTTGGTC GATAGAATTT TATGCTGATG GCTTGATGGA TGAACTTTTT
GCTGATATCG ACGAGATTCT TGATGTGAAC TTGCCGCACC TGACTAACAC AAGAGGTAGA
CAAATGCGCC AAGCATCTCC AGTCAGTAGG ATGAATGAAA CTGCCGCCAG TGATTGGTTC
CATAGTTCCA GCAACCCTTC CCATCATCAA ACTTTAGAAT ATGAACATTT GCAAACCCTA
GATGTGCCGC AAATTGTTTT ACCCAACTCA CTCAATCGAG GCGTACAGAG TGTATCTTCT
GTCATTAGTA GACAGGGAGG GAAGGTTGTA GTTGAGTCTC AATCTGTCAA ACAGATGACG
AGAATCCGTC AGCAAACTCA ACTAACTTTG GGCAAAATGC TGATTGTGGG GACAACCCTT
GGTGTGGCGA TCGCTGGTGT ACTATATATA TTGCAATCGG GTGTGTTAGT TCTACTCACT
GCCAAACTCA CCCAGCCAAA TCTTAATGTA CGACAAGCAC AACTACTTCC TCAGCCAGAT
GTGCAGGGAG AGTTAGCTAA CTATATGCTA GGAGCGCTGG CAGTTATCGA TAAATCAGAT
ATCCAAAATC GGCAACCAGC TACTTCGGAA ATTGGCAGCA GGATGACTTA TAGTCCCACA
GCCTCAGCTT TCAACAACAG TCAGCCGCCA CCAGGTAATC TACCATCCCC CCTCATTGCC
AATAATACAT CGCCAGCACC TAGCCGTTCT AACGTTGTTG AGCGCATTTA CATTCCTGTT
TATCAAGCGC CCTTACCGAT GCGCTACGCA CCACCAGTAA TTCCTGGCTC ACCTTTACCA
CCAGTTGCGA ATAATTCGGC TACGGGTCAA CCAAACATAG TGAAAAATAC CTTAACTCAA
GTGCAACCAG CAGGCAAACC TGCAAACGTT AATATATTAG CCTCGGCTGT GCGTTCAGAA
CTGAAGCCAG TAGCTGTACG TAACGCACCA ATTAACATCC AACCAGCACC TAAATTACTC
CCAAACCTGC CTGTCGTTCC ATTCGGTGCG AGTCTACCGA AACAGCCTAA CACTGGTGGG
GAAGCAGTAC CTGTGGCATC ACTCACCGTG AATGCTCCTG CACCAGCCCC TATCCATACC
CTAGAAGGCT TATTAGAATT GGGAAATAAA TCTGTCGCCT TATTTCAAGT TAATGGTACT
AGCCGCCGTG TTAGCATTGG TGAAACTATT GGTGCTAGTG GTTGGACTTT AGTTGATGTC
AATAATGGTG AAGCTATAGT CCGGCGTAAT GGTGAGGTGC GATCAATATA TGCTGGGCAG
AAACTATAA
 
Protein sequence
MLMLQEVSTH LIIPEPSEDL IVNEPWSIEF YADGLMDELF ADIDEILDVN LPHLTNTRGR 
QMRQASPVSR MNETAASDWF HSSSNPSHHQ TLEYEHLQTL DVPQIVLPNS LNRGVQSVSS
VISRQGGKVV VESQSVKQMT RIRQQTQLTL GKMLIVGTTL GVAIAGVLYI LQSGVLVLLT
AKLTQPNLNV RQAQLLPQPD VQGELANYML GALAVIDKSD IQNRQPATSE IGSRMTYSPT
ASAFNNSQPP PGNLPSPLIA NNTSPAPSRS NVVERIYIPV YQAPLPMRYA PPVIPGSPLP
PVANNSATGQ PNIVKNTLTQ VQPAGKPANV NILASAVRSE LKPVAVRNAP INIQPAPKLL
PNLPVVPFGA SLPKQPNTGG EAVPVASLTV NAPAPAPIHT LEGLLELGNK SVALFQVNGT
SRRVSIGETI GASGWTLVDV NNGEAIVRRN GEVRSIYAGQ KL