Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3529 |
Symbol | |
ID | 3679553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4385234 |
End bp | 4386304 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637718881 |
Product | hypothetical protein |
Protein accession | YP_324031 |
Protein GI | 75909735 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTGA AACTCAGTGC ATCCAAATTT CCCATAGCCC CTCTACTGTT AATTGCGCCA TTTTTCCTAT GGGGGACGGC AATGGTAGCA ATGAAAGGAG TCATACCCCA CACCACACCG TTTTTCATGG CGGGAGTGCG GCTGCTACCG GCGGGAGTGT TAATTTTAAT TGCCGCCGCA CTGTCAGGTA GACCCCAGCC TAATAGTTGG CAAGGGTGGT TGTGGATTGC CTTATTTGGG CTAGTGGATG GAACCTTATT TCAAGGGTTC TTAGCTGAGG GGTTAGTCCG TACCAGTGCG GGGTTAGGTT CAGTCATGAT TGACTCCCAA CCTTTAGCGG TGGCGTTGCT GTCGTTGTGG CTATTTCAAG AACGGATTGG TTTATGGGGA TGGCTGGGAT TAGGTCTGGG AGTCACAGGA ATTAGTTTAA TTGGCTTACC TGATGAGTGG ATTTTCAGTT TACTAGGTAC AGGTGCAGAG GTGACGATTG GCAACTGGCA AAACCTGTTT GCCAGTGGTG AATGGTTAAT GTTGTTGGCG GCGTTGTCAA TGGCCGTAGG AACGGTGTTA ATTAGATTTG TGACGCGGTA TGTAGACCCT GTAACGGCTA CAGGCTGGCA CATGATTATC GGTGGTTTGC CATTGTGGGG AATTTCCGCA GTCGTAGAAT CTCAACAATG GGAAAATCTG GTAGGTTCGG AATGGCTAGC TTTAGCTTAT GCTACCGTCT TTGGCAGTGC GATCGCCTAC GGATTATTTT TCTACTTCGC TTCTAGTGGT AGTCTTACCA GTCTCAGTTC CCTCACCTTC CTTACTCCCA TATTTGCTCT GTTATTCGGT CATCTCTTAC TTTCAGAAGT TCTCTCTACC TTGCAATGGG TAGGAGTATT CCTCACTTTA ATCAGCATCT ACCTCATAAA TCAGCGTGAT AACCTGGCAG GACAAAACAA AAAGTCTGTC ATGGAAGAAA TATCTGCAAA ATCCCAACCA ATGCTCGCAG AAGCAACTAC GAAAAAGCTC AACCCCTTAG CTGTAAAAGT CAGAGAATCT GAGCCAGAAA CTCTACCCTA A
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Protein sequence | MQLKLSASKF PIAPLLLIAP FFLWGTAMVA MKGVIPHTTP FFMAGVRLLP AGVLILIAAA LSGRPQPNSW QGWLWIALFG LVDGTLFQGF LAEGLVRTSA GLGSVMIDSQ PLAVALLSLW LFQERIGLWG WLGLGLGVTG ISLIGLPDEW IFSLLGTGAE VTIGNWQNLF ASGEWLMLLA ALSMAVGTVL IRFVTRYVDP VTATGWHMII GGLPLWGISA VVESQQWENL VGSEWLALAY ATVFGSAIAY GLFFYFASSG SLTSLSSLTF LTPIFALLFG HLLLSEVLST LQWVGVFLTL ISIYLINQRD NLAGQNKKSV MEEISAKSQP MLAEATTKKL NPLAVKVRES EPETLP
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