Gene Ava_3529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3529 
Symbol 
ID3679553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4385234 
End bp4386304 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content47% 
IMG OID637718881 
Producthypothetical protein 
Protein accessionYP_324031 
Protein GI75909735 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTGA AACTCAGTGC ATCCAAATTT CCCATAGCCC CTCTACTGTT AATTGCGCCA 
TTTTTCCTAT GGGGGACGGC AATGGTAGCA ATGAAAGGAG TCATACCCCA CACCACACCG
TTTTTCATGG CGGGAGTGCG GCTGCTACCG GCGGGAGTGT TAATTTTAAT TGCCGCCGCA
CTGTCAGGTA GACCCCAGCC TAATAGTTGG CAAGGGTGGT TGTGGATTGC CTTATTTGGG
CTAGTGGATG GAACCTTATT TCAAGGGTTC TTAGCTGAGG GGTTAGTCCG TACCAGTGCG
GGGTTAGGTT CAGTCATGAT TGACTCCCAA CCTTTAGCGG TGGCGTTGCT GTCGTTGTGG
CTATTTCAAG AACGGATTGG TTTATGGGGA TGGCTGGGAT TAGGTCTGGG AGTCACAGGA
ATTAGTTTAA TTGGCTTACC TGATGAGTGG ATTTTCAGTT TACTAGGTAC AGGTGCAGAG
GTGACGATTG GCAACTGGCA AAACCTGTTT GCCAGTGGTG AATGGTTAAT GTTGTTGGCG
GCGTTGTCAA TGGCCGTAGG AACGGTGTTA ATTAGATTTG TGACGCGGTA TGTAGACCCT
GTAACGGCTA CAGGCTGGCA CATGATTATC GGTGGTTTGC CATTGTGGGG AATTTCCGCA
GTCGTAGAAT CTCAACAATG GGAAAATCTG GTAGGTTCGG AATGGCTAGC TTTAGCTTAT
GCTACCGTCT TTGGCAGTGC GATCGCCTAC GGATTATTTT TCTACTTCGC TTCTAGTGGT
AGTCTTACCA GTCTCAGTTC CCTCACCTTC CTTACTCCCA TATTTGCTCT GTTATTCGGT
CATCTCTTAC TTTCAGAAGT TCTCTCTACC TTGCAATGGG TAGGAGTATT CCTCACTTTA
ATCAGCATCT ACCTCATAAA TCAGCGTGAT AACCTGGCAG GACAAAACAA AAAGTCTGTC
ATGGAAGAAA TATCTGCAAA ATCCCAACCA ATGCTCGCAG AAGCAACTAC GAAAAAGCTC
AACCCCTTAG CTGTAAAAGT CAGAGAATCT GAGCCAGAAA CTCTACCCTA A
 
Protein sequence
MQLKLSASKF PIAPLLLIAP FFLWGTAMVA MKGVIPHTTP FFMAGVRLLP AGVLILIAAA 
LSGRPQPNSW QGWLWIALFG LVDGTLFQGF LAEGLVRTSA GLGSVMIDSQ PLAVALLSLW
LFQERIGLWG WLGLGLGVTG ISLIGLPDEW IFSLLGTGAE VTIGNWQNLF ASGEWLMLLA
ALSMAVGTVL IRFVTRYVDP VTATGWHMII GGLPLWGISA VVESQQWENL VGSEWLALAY
ATVFGSAIAY GLFFYFASSG SLTSLSSLTF LTPIFALLFG HLLLSEVLST LQWVGVFLTL
ISIYLINQRD NLAGQNKKSV MEEISAKSQP MLAEATTKKL NPLAVKVRES EPETLP