| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3508 |
|---|
| Symbol | |
|---|
| ID | 3679610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 4355531 |
|---|
| End bp | 4358977 |
|---|
| Gene Length | 3447 bp |
|---|
| Protein Length | 1148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637718860 |
|---|
| Product | signal transduction protein |
|---|
| Protein accession | YP_324010 |
|---|
| Protein GI | 75909714 |
|---|
| COG category | [C] Energy production and conversion
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1413] FOG: HEAT repeat
[COG5635] Predicted NTPase (NACHT family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.139224 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGGTG CAATGGTTGG TGCATGGGTA GGAGAATTAG TCACAGTAGA AGTTTCTAAA
GCTTTACTGA GTGGTGTTAC GAGCAAACTT AACCCTAGTG ATTTAGATAA GGCGATTAAA
ACTGCAACGA TAGAAGCTTG TAAGCAAGAA ACCCGATTAT TTTATTCTTG TCCACCAGAC
TTTATACCAA AATTTTTATG TAATTTTTTT AAAGAACAAG GATTGTCAGA GCTACAGAAA
CCTTTAGAAA ATGAGGGAAA GCCTGATGTA GATTATTTAG CTGTTGTTTT CCAAAAAGCA
GCTTTAGCTG ACTCAAAAAT GAAAGAAATT AAAATTGATT ATGTTTATTC ATGGATGGAG
GTTTTTGTTA CAACTTATTT TCAAAATACA GATAATTGCA TAAGGTTTCA GATTGCCAAG
GAAAACTATC TTCAGCAATT AGTAAATTGG TTTGATGATG TTAAGTTTGC TGGGATTGCT
GTACCAGGAC AAGAAGTAGA AAAATCGGAG AAGCTAGTAA ATATTTTTGT ATTACCAGAA
GTGCAGGAGG ATAACCACAA GGATATAAAT AATCTCAACT CCAGCATCGA AACAGAGTTA
TTGTCATCCA ATTTGAGCCA AAGTCAGCAA CAATTACTTT GGGAACAGAG ACAGCGTGCT
TTAAGAAAAT CTTCCGGGAG AAAATTTTTA GCTTCCCAAA TTTTAAGTCA AACCAACTGC
CAAAAGTTTG TTCTTTTAGG TGCGCCCGGC TCTGGAAAAA CTACTTTACT GAGTTATTTT
GTGGTGATGT TAGCTCAGAA GCAGATTGAA CAACTGAATA TAACAGCAGC AGACTATTTA
CCTATTATAA TTCCTATACG AGATTTTGCT AGGCAAGCAA ATATTAGCGT TATTGAATAT
GTTAAGCAAT TTGTTGAAAA AAATCTATGT GTTAAAACCT TACCTGTAGG TTTTTTTGAA
TATTGGTTAG AAGATGGACA CACTTTTATC TTTTTTGATG GATTGGATGA AATTGCTCAG
GAAAATAAAC GATATGATGT AGTGCGGAAA ATTGAGAATT TTTTAGGACA ATTTCCGACA
AATTGTGCAG TTATTACTTC TCGTCCTGCT GGTTATAAAC GTGATTTTTT CAATACTCAA
GAGTTTGCCC ATTACGAGCT TTTATCTTTT GATGATGAGA AGATAGAAAA GTTTATTAAC
TGTTGGTATA ACAGCCGTAT TCAGGATAAA TCAGAGGCAG AGCGACGTAA AACAACTTTA
CGAGAAGCAT TAAATAAAAA TGAGCGTCTC AAATTACTAG CGCGTAACCC TTTGCTGTTG
ACTATTATTG CTCTGATTCA CCGCTACCAG GCAGTTTTGC CTAAAGGTCG TCACAAACTT
TATGAGAAAG CCGTAGAAAC TCTCTTAACT TCTTGGGATG CGAATAAGGA AATTAACGTC
AACCATTTTT TACAAGATAT TGATATTGAA GATTTACTAT TTTTGATGCG AAAATTAGCC
TTTTGGATTC ATGGACAAGG CAGTACAGCA GATAAAGAAG GGGGAACACT AATTGCTTGT
GAAGATTTGC TTGACAAATT AAAAAGAGAA ATCAAATCTT TGAAGGAAAT TGAACTTTAT
AAAGCAGAGG AGAAAGCGAA ACGGTTTTTA AGTTTGATTC AGGAACGTAC TGGACTGCTT
AATGAACAAG GTCAAGATTG CTATGCTTTT GTGCATAAAA CCTTTCAGGA ATATCTGTGT
GCTAGAGAAA TTAATTATCA AGCAGACGAT CAAGACGATT TTGATATTGT TTTACAGTAT
ATTGATCAGC ATCTCCATGA CCCTCATTGG CGAGAGGTAT TACTGCTATT AATTACTCAG
CAAGCACCAA ATAAAGCGGC TACAGCTATT AGAAAAGTTC TCAGCAAGAA TAGCGAATAT
GAACAGTGGT TGCATCGTGA CTTATTATTT GCTGGGAATT GCCTTGCTGA AGATATCAAA
AATTTAAAAA CTGCCAAAGA TTCTCCAGCC ATAGAAATTT TACAAAATTT AGTAAATCTT
GAAGTCAGCG ATTCTTTGCA AGTTAGTTCT CAAATTAAAT CACAAGTATT TCAAATTTTA
TGTAGCCTGA ATGAAACGGC TTTTCAAACT CAAGCTTTGC AATTGTTAAA AGAGAAAGAA
CAACAAATAG AACAAGTACG ATTTCAAAAA TATCGTGCTG CATTAGGAGA GAAAAAGGCG
GCAGTTGATA GATTACTAGA ACTCCTCAAA GACTCAGAAT CTAATGTGCG GTCTAGTGCC
GCAAATGCGT TAGGTAGAAT AGGTACAGAA ACAGCAATTC CTGGCTTACT AGAACTCCTC
AAAGACTCAG AATCTAATGT GCGGTCTAGT GCCGCAAATG CGTTAGGTAA CATAGGTACA
GAAACAGCAA TTCCTGGCTT ACTAGAACTC CTCAAAGACT CAGAATCTAA TGTGCGGTCT
AGTGCCGCAT TTGCGTTAGT TAGAATAGGT ACAGAGGCAG CAATTCCTGG CTTACTAGAA
CTCCTCAAAG ACTCAGAATC TAATGTGCGG TCTAGTGCCG CATTTGCGTT AGGCATAATA
GGTACAGAAG CAGCAATTCC TGGCTTACTA GAACTCCTCA AAGACTCAGA ATCTAATGTG
CGGTCTAGTG CCGCATTTGC GTTAGGTAGA ATAGGTACAG AAGCAGCAAT TCCTGGCTTA
CTAGAACTCC TCAAAGACTC AGAATCTAAT GTGCGGTCTA GTGCCGCAGA TGCGTTAGGT
AATATAGGTA CAGAAGTAGC AATTCCTGGC TTACTAGAAC TTCTCAAAGA CTCAGAATCT
AATGTGCGGT CTAGTGCCGT AAATGCGTTA GTTAGAATAG GTACAGAAGC AGCAATTCCT
GGCTTACTAG AACTCCTCAA AGACTCAGAA TCTAATGTGC GGTCTAGTGC CGCATTTGCG
TTAGGTAACA TAGGTACAGA AGCAGCAATT CCTGGCTTAC TAGAACTCCT CAAAGACTCA
GAATCTAATG TGCGGTCTAG TGCCGCATTT GCGTTAGGTA ACATAGGTAC AGAAGCAGCA
ATTCCTAGCT TACTAGAACT CCTCAAAGAC TCAGAATCTA ATGTGCGGTC TAGTGCCGCA
AATGCGTTGG GTAACATAGG TACAGAAGCA GCAATTCCTA GCTTACTAGA ACTTCTCAAA
GGCTCAGAAT TGAATGTGCG GTCTAGTGCC GCATTTGCGT TGGGTAATAT AGGTAAAGAA
GCAGCAATTC CTGGCTTACT AGAACTCCTC AAAGACTCAG AATTTAATGT GCGTCTTATT
GGCGCATTTG TGCTGAAGAA AATCGATGAA AAAACTCATA GCGTAGTCAT TAATCTTTCT
CGATGGATTA ATGAAAACCA AGATTCTGAA TATATTGGAG ATGGGATAGA TTTGCTATGG
GAATTGATAT GTGGCGAGAC AACCTGA
|
|---|
| Protein sequence | MIGAMVGAWV GELVTVEVSK ALLSGVTSKL NPSDLDKAIK TATIEACKQE TRLFYSCPPD
FIPKFLCNFF KEQGLSELQK PLENEGKPDV DYLAVVFQKA ALADSKMKEI KIDYVYSWME
VFVTTYFQNT DNCIRFQIAK ENYLQQLVNW FDDVKFAGIA VPGQEVEKSE KLVNIFVLPE
VQEDNHKDIN NLNSSIETEL LSSNLSQSQQ QLLWEQRQRA LRKSSGRKFL ASQILSQTNC
QKFVLLGAPG SGKTTLLSYF VVMLAQKQIE QLNITAADYL PIIIPIRDFA RQANISVIEY
VKQFVEKNLC VKTLPVGFFE YWLEDGHTFI FFDGLDEIAQ ENKRYDVVRK IENFLGQFPT
NCAVITSRPA GYKRDFFNTQ EFAHYELLSF DDEKIEKFIN CWYNSRIQDK SEAERRKTTL
REALNKNERL KLLARNPLLL TIIALIHRYQ AVLPKGRHKL YEKAVETLLT SWDANKEINV
NHFLQDIDIE DLLFLMRKLA FWIHGQGSTA DKEGGTLIAC EDLLDKLKRE IKSLKEIELY
KAEEKAKRFL SLIQERTGLL NEQGQDCYAF VHKTFQEYLC AREINYQADD QDDFDIVLQY
IDQHLHDPHW REVLLLLITQ QAPNKAATAI RKVLSKNSEY EQWLHRDLLF AGNCLAEDIK
NLKTAKDSPA IEILQNLVNL EVSDSLQVSS QIKSQVFQIL CSLNETAFQT QALQLLKEKE
QQIEQVRFQK YRAALGEKKA AVDRLLELLK DSESNVRSSA ANALGRIGTE TAIPGLLELL
KDSESNVRSS AANALGNIGT ETAIPGLLEL LKDSESNVRS SAAFALVRIG TEAAIPGLLE
LLKDSESNVR SSAAFALGII GTEAAIPGLL ELLKDSESNV RSSAAFALGR IGTEAAIPGL
LELLKDSESN VRSSAADALG NIGTEVAIPG LLELLKDSES NVRSSAVNAL VRIGTEAAIP
GLLELLKDSE SNVRSSAAFA LGNIGTEAAI PGLLELLKDS ESNVRSSAAF ALGNIGTEAA
IPSLLELLKD SESNVRSSAA NALGNIGTEA AIPSLLELLK GSELNVRSSA AFALGNIGKE
AAIPGLLELL KDSEFNVRLI GAFVLKKIDE KTHSVVINLS RWINENQDSE YIGDGIDLLW
ELICGETT
|
|---|
| |