Gene Ava_3498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3498 
Symbol 
ID3679771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4338039 
End bp4340123 
Gene Length2085 bp 
Protein Length694 aa 
Translation table11 
GC content43% 
IMG OID637718850 
ProductN-6 DNA methylase 
Protein accessionYP_324000 
Protein GI75909704 
COG category[V] Defense mechanisms 
COG ID[COG0286] Type I restriction-modification system methyltransferase subunit 
TIGRFAM ID[TIGR00497] type I restriction system adenine methylase (hsdM) 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.100632 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCCCAG AAGAACTAAA ACAACTTGAA GCGAACCTTT GGCAAAGTGC TGATACCCTA 
CGGGCAAACT CAGACCTGAA ATCTAGTGAG TATTCTACGC CCGTGATGGG GTTAATATTT
CTCAAGTTTG CTGATAACAA ATATCGCCAG TATGCGGCAG AGATTCAGCA AGAATATGAA
GCACTCAAAG GAACTCGCAG AGAAAAGGCG ATCGCCGAAA TTGCCATTGA GAAGTGTGGG
TTTTATCTGC CAGACCATGC TCGTTATAAC TATTTGCTCA ACCTACCAGA AGAGGAAGAT
ATCGCCAAGG CTATCAAAGC GGCGATGGTG TCCATTGAAT CATATAAGCC AGAACTTAAG
GACACCTTAC CCCAAGATGA GTATTTTCGG CTGACGCGCA CAGACAAAGG TATTCCGAAG
CAACTGTTAA AAAACTTCTC GAATATTCCT GAAAATGCTA CTGGGGATAT GTTCGGGCAG
ATTTATGAGT ATTTTCTGGG TAATTTTGCT CTCTCAGAAG GGCAGGGTGG AGGTGAGTTT
TTCACACCGC GTTCTGTGGT GCGGTTGATG GTAGAAATCA TTGAACCTCA TCAGGGGACT
GTGTTTGACC CCGCTTGTGG TTCTGGGGGA ATGTTTGTCC AGTCTGCTCA ATTTATTGAA
GAACAGCGCA AAAAGTTAAA TCAGTCTGCT GCTGACGATC TGTTTGTCTA TGGGCAAGAG
AAGACCCTGG AGACGGTGAA GTTGGCAAAA ATGAACATTG CAGTCAATGG GTTACGGGGC
GATGTGCGTC AGACAAATAC GTACTATGAA GACCCGTTTG GCAGTTTTGG CAAGTTTGAT
TATGTCCTAG CTAATCCGCC ATTTAATGTG GATGATGTTA ATCTTAGCCG AGTGGAAATC
GATGCTAGAT TTAACACCTA CGGTATCCCG CGCAATAAGA CTAAGGGGAA GAAGCAGGAA
CAGGGTAATG AGACTGTACC TAATGCCAAT TATCTTTGGA TTAATTTATT TGCTACATCG
CTAAAACCCA AGGGTAGGGC GGCGTTAGTA ATGGCTAATT CGGCATCAGA TGCGCGTCAC
TCTGAAGCAG ATATTCGCCA AAAGCTAATT GAAGAAAATT TGATTTATGG GATGCTGACG
CTGCCATCAA ATATGTTTTA TACGGTGACG CTACCTGCAA CTCTGTGGTT TTTTGATCGG
GGCAAGACGG ATGATAAAAT TCTGTTTATT GATGCGCGAA ATATTTTTAC TCAGGTTGAC
CGCTCACATC GGGAGTTTTC CACAGAACAA ATTAGTAATA TTGCTATTAT CAGCCATTTG
CGCCGGGGTA GGAGCCATCG GTTTATTGAA CTGATTAATA ATTATTTTCA GCAAGGGATG
GTGAAGCTAA GAGAGAATCA AGCACAGGTG CAGCAAGTTT CCCAGCAGTT AATCACTGTG
TTGAATGATG GAATGGATGA TATTAAAGCT AGGGAAGCGG CTGTTGATTT TCTCAATTTG
TGGGATGATT TGCCAGATTT AGAAATTCAG TATCAAGGTT ATTTAGATAA ATATAATTTT
CCAGAAATAA ATATAGAAAT ACAAAATCAA GCACAGCAAG AACTCAGTGC GGCATTTAAA
CCATTTTTTG ATGACATCCA TCTGGGATTG AAGCAGCTTG ATAAAACTAT CCGCGCCCAT
GAAACGGCTT TGGCAGAAAA AGCAAAGGAA GAGGGGAAAC GGGGACAGAT TGACAAGCAA
GTTAAGACTC TCAAAGCCAC GCTGGAAACG CTGCATACAG ATGTAAAATC GGCAGAATCA
TTTTTTATCC ACATTCGCTG GTTACAGGAA CGTTTCCCGA AGGCAGAATA TGAGGATGTG
ACGGGGTTGT GTAAGTTGGC GACTCCCGCA GATGTGAAGG AACAGGATTA TTCCCTAAAT
CCTGGGCGGT ATGTGGGGGT AGTGATTGAG GAAGATGGGA AGACGGAGGA GGAGTTTATT
GAGGAGATTT TAGGGTGGAA TACAGAGTTA GAAAAGCTGA ATCAGGAAGC AATAAAACTA
GGAGACGTAA TACGTCACAA TATTCAGCAG TTAGTAGGGG AATAA
 
Protein sequence
MTPEELKQLE ANLWQSADTL RANSDLKSSE YSTPVMGLIF LKFADNKYRQ YAAEIQQEYE 
ALKGTRREKA IAEIAIEKCG FYLPDHARYN YLLNLPEEED IAKAIKAAMV SIESYKPELK
DTLPQDEYFR LTRTDKGIPK QLLKNFSNIP ENATGDMFGQ IYEYFLGNFA LSEGQGGGEF
FTPRSVVRLM VEIIEPHQGT VFDPACGSGG MFVQSAQFIE EQRKKLNQSA ADDLFVYGQE
KTLETVKLAK MNIAVNGLRG DVRQTNTYYE DPFGSFGKFD YVLANPPFNV DDVNLSRVEI
DARFNTYGIP RNKTKGKKQE QGNETVPNAN YLWINLFATS LKPKGRAALV MANSASDARH
SEADIRQKLI EENLIYGMLT LPSNMFYTVT LPATLWFFDR GKTDDKILFI DARNIFTQVD
RSHREFSTEQ ISNIAIISHL RRGRSHRFIE LINNYFQQGM VKLRENQAQV QQVSQQLITV
LNDGMDDIKA REAAVDFLNL WDDLPDLEIQ YQGYLDKYNF PEINIEIQNQ AQQELSAAFK
PFFDDIHLGL KQLDKTIRAH ETALAEKAKE EGKRGQIDKQ VKTLKATLET LHTDVKSAES
FFIHIRWLQE RFPKAEYEDV TGLCKLATPA DVKEQDYSLN PGRYVGVVIE EDGKTEEEFI
EEILGWNTEL EKLNQEAIKL GDVIRHNIQQ LVGE