Gene Ava_3485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3485 
Symbol 
ID3679758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4322126 
End bp4324027 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content45% 
IMG OID637718837 
Productglucosamine--fructose-6-phosphate aminotransferase 
Protein accessionYP_323987 
Protein GI75909691 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 
TIGRFAM ID[TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.739324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.133016 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGGCA TCGTTGGGTA TATCGGAACT CAAGCAGCAA CCGAGATTTT GTTGGCTGGG 
CTAGAAAAAC TAGAGTATCG CGGTTACGAT TCCGCAGGTA TAGCTACGGT TTGGGAAGGA
GATGTGAATT GTGTCAGGGC AAAGGGAAAA CTCCATAACC TGCGTTCTAA ACTAGAACAG
TTGGCTACTC CATCTCAAAT TGGTATTGGT CATACACGCT GGGCAACTCA TGGTAAACCA
GAGGAGTATA ATGCCCATCC CCATTTAGAT ACAGCCATGC GAATCGCTGT TGTGCAGAAT
GGGATTATTG AAAATTACCG CGAGTTACGC GACGAACTGA AACAGAAAGG ACATGAGTTT
CGTTCGGAAA CTGATACAGA AGTTATTCCT CACCTTATAG CCGAATTTTT AAAAAACCTC
CCTTCCCCAG CGCTTCCTAC CTCCTCCTCT TCCTTATTGG AAGCGATACG CCAAGCTGTT
AACCACCTGC AAGGGGCATT TGCGATCGCT GTTATCTCTG CTGACTATCC TGACGAATTG
ATTGTTGTCC GCCAGCAAGC GCCCCTGGTG ATAGGATTCG GGCAAGGGGA GTTCTTTTGC
GCCTCCGACA CGCCGGCGAT CGTTTCCCAT ACTCGCGCAG TCTTACCCCT GGAGAATGGC
GAAATTGCCC GTCTGACACC CCTGGGAGTG GAGATTTATA ACTTTGCTGG GGACAGACTG
AAAAAACAAC CCCGCCTGCT CAACTTGAAT CCCACAATGG TAGAGAAGCA GGGATTCAAA
CACTTCATGC TCAAGGAAAT TTATGAGCAA CCAGGAGTAG TCAGAGCGAG TTTAGAAGCA
TACTTTAATC CCGATACTAA TACTGATGAA TCCTTTACAT CACCAGTTAA TTTGGGTTTA
TCTGAAGAAA TCTATGCAGA TTTAGAACAA ATTCATATTG TTGCCTGTGG TACGAGTTGG
CACGCCGCCT TAGTAGGAAA GTATTTACTT GAACAATTAG CAGGAATTTC CACTCAAGTA
CATTATGCTT CTGAGTATCG CTATGCCCCA TCACCATTAA CAGCGAATAC ATTGATTATC
GGTGTTACTC AGTCAGGGGA AACGGCTGAT ACCCTAGCCG CCTTAGCGAT GGAAAAAGAA
CGCCGCCAAG GCAAAGAAGC CAAATATCAG GCGCGACTCT TGGGTATTAC CAATCGTCCA
GAAAGTAGCC TTGGTCATCT TGTACCCCAT ATTATTAATA CCCTGGCAGG GATTGAAATT
GGTGTAGCAG CGACTAAAAC CTTTGTTGCT CAACTTATGG CGTTTTATGC CCTAGCCTTG
GATTTAGCCT ATCATCGCCA AACAGTAGCA CCAGATAAAC TCGCAGATAT TATTCAAGGT
TTACGTCAGA TACCTAAGGA AATCGAAGCT ACCTTAGAAC GTCAGGAAAA ATTAACAGAA
CATCTAGCCC ATGAATTTGC AGAAACCCAA GACTTCATCT TTTTGGGCAG AGGAATTAAC
TTCCCTATTG CTTTAGAAGG AGCATTGAAA TTAAAAGAAA TCAGCTACAT TCACGCAGAA
GGTTATCCGG CTGGGGAAAT GAAACACGGC CCCATTGCAT TATTAGATGC CAAAGTGCCG
GTAGTGGCGA TCGCCTATCC TGGTAGTGTG TATGAAAAAG TGATTTCCAA TTCTCAAGAA
GCCAAAGCCA GAGATTCCCG GTTAATTGGT GTAACACCAG TCAATGATGG CGAAGCGGCG
GAAATCTTTA ACGATTTGCT TCCTGTATCA TCAGTAGATG AATTACTATC GCCCATCCTC
ACAGTAGTGC CATTGCAACT ATTGGCTTAC CACATCGCCG CCCGTCGCGG TTTGGATGTC
GATCAGCCTC GGAATTTAGC AAAATCAGTG ACTGTGGAAT AA
 
Protein sequence
MCGIVGYIGT QAATEILLAG LEKLEYRGYD SAGIATVWEG DVNCVRAKGK LHNLRSKLEQ 
LATPSQIGIG HTRWATHGKP EEYNAHPHLD TAMRIAVVQN GIIENYRELR DELKQKGHEF
RSETDTEVIP HLIAEFLKNL PSPALPTSSS SLLEAIRQAV NHLQGAFAIA VISADYPDEL
IVVRQQAPLV IGFGQGEFFC ASDTPAIVSH TRAVLPLENG EIARLTPLGV EIYNFAGDRL
KKQPRLLNLN PTMVEKQGFK HFMLKEIYEQ PGVVRASLEA YFNPDTNTDE SFTSPVNLGL
SEEIYADLEQ IHIVACGTSW HAALVGKYLL EQLAGISTQV HYASEYRYAP SPLTANTLII
GVTQSGETAD TLAALAMEKE RRQGKEAKYQ ARLLGITNRP ESSLGHLVPH IINTLAGIEI
GVAATKTFVA QLMAFYALAL DLAYHRQTVA PDKLADIIQG LRQIPKEIEA TLERQEKLTE
HLAHEFAETQ DFIFLGRGIN FPIALEGALK LKEISYIHAE GYPAGEMKHG PIALLDAKVP
VVAIAYPGSV YEKVISNSQE AKARDSRLIG VTPVNDGEAA EIFNDLLPVS SVDELLSPIL
TVVPLQLLAY HIAARRGLDV DQPRNLAKSV TVE