Gene Ava_3466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3466 
Symbol 
ID3679778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4295958 
End bp4297484 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content46% 
IMG OID637718818 
Productlight-independent protochlorophyllide reductase subunit B 
Protein accessionYP_323968 
Protein GI75909672 
COG category[C] Energy production and conversion 
COG ID[COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains 
TIGRFAM ID[TIGR01278] light-independent protochlorophyllide reductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGG CTTACTGGAT GTATGCAGGC CCAGCCCACA TTGGCACTTT GCGAGTCGCA 
ACTTCATTTA AAAACGTCCA TGCTATTATG CACGCGCCTC TAGGCGATGA CTACTTTAAC
GTTATGCGCT CAATGCTGTC GCGGGAGCGG GACTTCACAC CAGTAACAAC CAGCGTGGTT
GACCGCCATG TTTTAGCCCG TGGTTCTCAA GAAAAGGTGG TAGAAAACAT CACCCGCAAA
GATGCAGAGG AACACCCAGA TTTAATTGTC TTAACTCCCA CCTGTACCTC CAGTATTTTG
CAAGAAGACT TGGAAAACTT TGTCGAACGC GCCCAATTGG ATGCGAAAGG GGACGTATTA
CTGGCGGATG TGAACCACTA TCGGGTGAAC GAACTGCAAG CAGGCGATCG CACTCTCCAC
CAAATTGTTC AATACTATAT TGAAAAAGCC CGCAAAAAAG GCGAACTCCC AGAAGGGAAA
ACAGCCAAGC CCTCAGTTAA CATTATCGGC ATTTCTACCC TGGGGTTCCA CAATAACCAC
GACTGCACCG AACTCAAAAG GCTAATGGCT GATTTGGGAA TTGAGGTCAA CGCGGTCATT
CCTGAAGGCG CTTCCGTCCA CGAGTTGAAG AATTTACCCA GAGCTTGGTT TAACCTCGTT
CCTTACCGGG AATTGGGTTT AATGACAGCT AGTTACCTGG AAAAAGAATT TGGCACACCT
TGTATAGATA TTGTGCCAAT GGGTGTAGTA GAAACTGCCC GATGTATCCG TAAAATTCAG
GAAGTGATTA ACGCTCAAGG TGCTGATGTT AATTACGAAG AGTATATCAA CGAGCAAACC
TTGTATGTAT CCCAAGCTGC CTGGTTCTCC CGTTCCATCG ACTGTCAAAA CCTGACTGGG
AAAAAAGCAG TGGTTTTTGG CGACAACACC CACGCCGCCG CCTTGACAAA GATTTTGTCC
CGCGAAATGG GGATTCACGT TGTTTGGGCG GGAACCTACT GCAAGTATGA TGCTGATTGG
TTCCGCGAAC AAGTAAGCGA GTATTGCGAT GAAGTACTGA TTACGGAAGA TCATGGGGAA
ATTGGGGATG CGATCGCCCG TGTTGAACCC TCCGCCATCT TCGGTACACA AATGGAACGC
CACGTTGGTA AGCGTTTAGA TATTCCTTGT GGTGTGATTG CTGCACCCAT TCACGTACAA
AACTTCCCCA TCGGTTACAA ACCATTCTTG GGTTATGAAG GAACCAATCA AATCACAGAT
TTAATCTACA ATTCCTTTAC TTTAGGTATG GAAGACCACC TATTAGAAAT ATTTGGTGGA
CATGATACCA AGGAAGTAAT TACTAAAGGT ATTTCTGCTG AATCTGACCT GAGTTGGACA
AAAGACGGCT TGGCAGAACT GAACAAAATC CCTGGTTTCG TGCGGGGAAA AGTCAAGCGG
AATACAGAAA AATTTGCACG CGATCGCGGT TTTAAAGATA TCTCAGCAGA GGTGTTATAC
GCAGCCAAGG AAGCAGTAGG AGCATAG
 
Protein sequence
MKLAYWMYAG PAHIGTLRVA TSFKNVHAIM HAPLGDDYFN VMRSMLSRER DFTPVTTSVV 
DRHVLARGSQ EKVVENITRK DAEEHPDLIV LTPTCTSSIL QEDLENFVER AQLDAKGDVL
LADVNHYRVN ELQAGDRTLH QIVQYYIEKA RKKGELPEGK TAKPSVNIIG ISTLGFHNNH
DCTELKRLMA DLGIEVNAVI PEGASVHELK NLPRAWFNLV PYRELGLMTA SYLEKEFGTP
CIDIVPMGVV ETARCIRKIQ EVINAQGADV NYEEYINEQT LYVSQAAWFS RSIDCQNLTG
KKAVVFGDNT HAAALTKILS REMGIHVVWA GTYCKYDADW FREQVSEYCD EVLITEDHGE
IGDAIARVEP SAIFGTQMER HVGKRLDIPC GVIAAPIHVQ NFPIGYKPFL GYEGTNQITD
LIYNSFTLGM EDHLLEIFGG HDTKEVITKG ISAESDLSWT KDGLAELNKI PGFVRGKVKR
NTEKFARDRG FKDISAEVLY AAKEAVGA