Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3453 |
Symbol | |
ID | 3679843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4283794 |
End bp | 4284468 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637718805 |
Product | two component transcriptional regulator |
Protein accession | YP_323955 |
Protein GI | 75909659 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGTTC TCTTTGTCGA AGATGAAGCG AAAATTGCTA ACTTCGTCCA AGCTGGACTG AAGGAACAGG GGTTTGTCGT AGACTATTGC GACAACGGTG ATGAAGGATA TTTGCGGGCA TTAGACAACG AATATGATGC CATCATCCTG GATATCATGG TTCCGGGGAA AGATGGACTA TCGATTCTCA AACAACTGCG GCAGAAGGGA CGGAATGCAC CGGTGATTTT GTTGACGGCT CGGAATGAGT TAGACGATCG CCTGGCGGGG TTGAATTTGG GTGCTGATGA CTACATTGCC AAACCTTTTT TTGTCGAGGA ACTGGTGGCG CGGATTCATG CTGTGGTGCG CCGGAGTATA GGCGATCGCC AAAATTTGTT GGTGATAGGG ACACTCAAGC TTGATCGCAT CACCAGAGAA GTTACTTGCA ATCAACGAGT CATCGAACTC ACCAGCCGGG AATTTAATCT TTTAGAGTAT TTAATGCGAT CGCCTGGGCG TGTTTTTACC CGTACCCAAA TCCTAGAACA CGTTTGGGGC TACGACTTTA ACCCTAATAC CAACGTCGTA GATGTTTGTA TTCAGCGAAT TCGCAAAAAA ATTGACCCTG TTGATGAAGC AGGCTGGATT GAAAGTATTC GCGGCGTGGG TTATCGTTTC CGCCATCCAA TATGA
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Protein sequence | MNVLFVEDEA KIANFVQAGL KEQGFVVDYC DNGDEGYLRA LDNEYDAIIL DIMVPGKDGL SILKQLRQKG RNAPVILLTA RNELDDRLAG LNLGADDYIA KPFFVEELVA RIHAVVRRSI GDRQNLLVIG TLKLDRITRE VTCNQRVIEL TSREFNLLEY LMRSPGRVFT RTQILEHVWG YDFNPNTNVV DVCIQRIRKK IDPVDEAGWI ESIRGVGYRF RHPI
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