Gene Ava_3453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3453 
Symbol 
ID3679843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4283794 
End bp4284468 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content47% 
IMG OID637718805 
Producttwo component transcriptional regulator 
Protein accessionYP_323955 
Protein GI75909659 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGTTC TCTTTGTCGA AGATGAAGCG AAAATTGCTA ACTTCGTCCA AGCTGGACTG 
AAGGAACAGG GGTTTGTCGT AGACTATTGC GACAACGGTG ATGAAGGATA TTTGCGGGCA
TTAGACAACG AATATGATGC CATCATCCTG GATATCATGG TTCCGGGGAA AGATGGACTA
TCGATTCTCA AACAACTGCG GCAGAAGGGA CGGAATGCAC CGGTGATTTT GTTGACGGCT
CGGAATGAGT TAGACGATCG CCTGGCGGGG TTGAATTTGG GTGCTGATGA CTACATTGCC
AAACCTTTTT TTGTCGAGGA ACTGGTGGCG CGGATTCATG CTGTGGTGCG CCGGAGTATA
GGCGATCGCC AAAATTTGTT GGTGATAGGG ACACTCAAGC TTGATCGCAT CACCAGAGAA
GTTACTTGCA ATCAACGAGT CATCGAACTC ACCAGCCGGG AATTTAATCT TTTAGAGTAT
TTAATGCGAT CGCCTGGGCG TGTTTTTACC CGTACCCAAA TCCTAGAACA CGTTTGGGGC
TACGACTTTA ACCCTAATAC CAACGTCGTA GATGTTTGTA TTCAGCGAAT TCGCAAAAAA
ATTGACCCTG TTGATGAAGC AGGCTGGATT GAAAGTATTC GCGGCGTGGG TTATCGTTTC
CGCCATCCAA TATGA
 
Protein sequence
MNVLFVEDEA KIANFVQAGL KEQGFVVDYC DNGDEGYLRA LDNEYDAIIL DIMVPGKDGL 
SILKQLRQKG RNAPVILLTA RNELDDRLAG LNLGADDYIA KPFFVEELVA RIHAVVRRSI
GDRQNLLVIG TLKLDRITRE VTCNQRVIEL TSREFNLLEY LMRSPGRVFT RTQILEHVWG
YDFNPNTNVV DVCIQRIRKK IDPVDEAGWI ESIRGVGYRF RHPI