Gene Ava_3443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3443 
Symbol 
ID3679911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4274396 
End bp4274839 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content45% 
IMG OID637718795 
Productputative anti-sigma regulatory factor (Ser/Thr protein kinase) 
Protein accessionYP_323945 
Protein GI75909649 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0106512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGGCA TAATGCAGCA CGACCATTTA ACAATTAAGA GCGAACTGAA GCTCCTTAAC 
CAAGTACAAC AATGGTTTGA GGACTTTTCC CTAAAATATC TGTCTCAACT CGGCTGGACA
GAAGGTCAAC TTTATCGCCT CAACTTAGCA CTAGCGGAGG GTTTTACAAA TGCAGTTCGT
CATGCACATC GTACTTTACC GCCAGAAACG ACCATAGAAA TTGAGGTCAG TCTATGGATT
AACAAAATAG AAATTAGAAT TTGGGATCAT GGCAATCCGT TTGATCCTGA TGCGATCGCT
GAACCAGCAC CAGGTACTCT ACAAGTGGGA GGCTATGGCT GGTTTCTCCT CCGGCGCTTG
GCTGACCGTG TGGTCTACGA ACGTAGCGAG GATGGTAGAA ATTGTTTGGT CATAGTTAAG
TATGCCAAGG AAGGGCAATA TTAG
 
Protein sequence
MLGIMQHDHL TIKSELKLLN QVQQWFEDFS LKYLSQLGWT EGQLYRLNLA LAEGFTNAVR 
HAHRTLPPET TIEIEVSLWI NKIEIRIWDH GNPFDPDAIA EPAPGTLQVG GYGWFLLRRL
ADRVVYERSE DGRNCLVIVK YAKEGQY