Gene Ava_3439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3439 
Symbol 
ID3679907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4270421 
End bp4271107 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content45% 
IMG OID637718791 
ProductBeta-lactamase-like 
Protein accessionYP_323941 
Protein GI75909645 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.254177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCCCT TACCTCAACA GCCTAGTCAT ATAACTAAGT CACCACGGGA TGTCTTGGAC 
GGTATTTTTG CTTTTCCACC AAATCGGGAC ACATTGGGGG GAACCTCTTA TCTCATTGTA
GGAAATGAAG GGAATATCCT CATAGATTGT CCCGCCTTAG ACCAAACAAA TTTAGATTTT
TTGCGATCGC ATGGTGGCGT AAAATGGCTA TTCCTCACCC ATCGTGGCGC TATTGGGAGA
ACAGCAGAAA TTCAACAAAA TTATGGCTGT GAAGTTATGA TTCAAGAACA AGAAGCCTAT
TTGCTACCAG GCTTAACTGT TACTACCTTC ACTCAAGAAT TTGACCTCAC CCCCACAGCC
AAAGCTATCT GGACACCCGG ACACTCTCCA GGCTCCTCTT GCTTGTACTA TAACTACCAG
GGTGGTGTAC TATTTTCCGG TCGCCATTTA CTTCCCAACC AACAAGGCGA ACCCGTTCCG
TTACGCACCG CTAAAACTTT TCATTGGCCC CGACAAATTA AGAGCTTACA AACAATCTTA
GAAGCCTTTA CCCCAGAAAC CCTGCAATAC ATCTGTCCCG GTGCTAACAC TGGTTTCCTC
AGAGGTAAAC GCTCCATAGA CACAGCCTAC CAACGCCTAG CCTCTTTGGA TTTAAAAGCT
TTACTCCAAA CACAACCGCT AATTTAA
 
Protein sequence
MCPLPQQPSH ITKSPRDVLD GIFAFPPNRD TLGGTSYLIV GNEGNILIDC PALDQTNLDF 
LRSHGGVKWL FLTHRGAIGR TAEIQQNYGC EVMIQEQEAY LLPGLTVTTF TQEFDLTPTA
KAIWTPGHSP GSSCLYYNYQ GGVLFSGRHL LPNQQGEPVP LRTAKTFHWP RQIKSLQTIL
EAFTPETLQY ICPGANTGFL RGKRSIDTAY QRLASLDLKA LLQTQPLI