Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3439 |
Symbol | |
ID | 3679907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4270421 |
End bp | 4271107 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637718791 |
Product | Beta-lactamase-like |
Protein accession | YP_323941 |
Protein GI | 75909645 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.254177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGTCCCT TACCTCAACA GCCTAGTCAT ATAACTAAGT CACCACGGGA TGTCTTGGAC GGTATTTTTG CTTTTCCACC AAATCGGGAC ACATTGGGGG GAACCTCTTA TCTCATTGTA GGAAATGAAG GGAATATCCT CATAGATTGT CCCGCCTTAG ACCAAACAAA TTTAGATTTT TTGCGATCGC ATGGTGGCGT AAAATGGCTA TTCCTCACCC ATCGTGGCGC TATTGGGAGA ACAGCAGAAA TTCAACAAAA TTATGGCTGT GAAGTTATGA TTCAAGAACA AGAAGCCTAT TTGCTACCAG GCTTAACTGT TACTACCTTC ACTCAAGAAT TTGACCTCAC CCCCACAGCC AAAGCTATCT GGACACCCGG ACACTCTCCA GGCTCCTCTT GCTTGTACTA TAACTACCAG GGTGGTGTAC TATTTTCCGG TCGCCATTTA CTTCCCAACC AACAAGGCGA ACCCGTTCCG TTACGCACCG CTAAAACTTT TCATTGGCCC CGACAAATTA AGAGCTTACA AACAATCTTA GAAGCCTTTA CCCCAGAAAC CCTGCAATAC ATCTGTCCCG GTGCTAACAC TGGTTTCCTC AGAGGTAAAC GCTCCATAGA CACAGCCTAC CAACGCCTAG CCTCTTTGGA TTTAAAAGCT TTACTCCAAA CACAACCGCT AATTTAA
|
Protein sequence | MCPLPQQPSH ITKSPRDVLD GIFAFPPNRD TLGGTSYLIV GNEGNILIDC PALDQTNLDF LRSHGGVKWL FLTHRGAIGR TAEIQQNYGC EVMIQEQEAY LLPGLTVTTF TQEFDLTPTA KAIWTPGHSP GSSCLYYNYQ GGVLFSGRHL LPNQQGEPVP LRTAKTFHWP RQIKSLQTIL EAFTPETLQY ICPGANTGFL RGKRSIDTAY QRLASLDLKA LLQTQPLI
|
| |