Gene Ava_3397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3397 
Symbol 
ID3680058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4224915 
End bp4225928 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content45% 
IMG OID637718747 
Productglycosyl transferase family protein 
Protein accessionYP_323899 
Protein GI75909603 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.257252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAATG GAGTAATTTT GGCCAGGGTG AACGAAGGAA ATGAAAGTAT TTCCGCCATT 
ATTCCTAATG TTTCCGTGGT GGTTCCAGTG CATGACGAAG TGGAAAGTCT GCCTTTATTA
TTGGAAGCGA TCGGATCTAC TTTATCTACT AGTGGGTTAA GTTATGAAAT TATTTGTGTG
GATGATGGCT CAACCGATGG TTCAGACGCA TTTCTCAAAG AACAAGCGCG CCTCCGTCCC
GACTTAAAAG CAGTGATTTT GCGGCGCAAT TACGGTCAAA CTGCGGCAAT GGCAGCTGGA
TTTAACTATG CTTTAGGTGA GGCGATCGTC ACCTTAGATG CTGATTTGCA AAACGATCCA
GAAGATATCC CGATTTTGTT GGCAAAGTTA GGGGAAGGTT ATGACTTGGT TAGTGGTTGG
CGACATCAAC GCCAGGATGC AGCTATCTCC CGGTTACTTC CTTCTAAAAT TGCTAACTGG
TTGATTGGCA AAATCACCGG CGTAAAACTG CACGATTATG GCTGTTCTCT GAAAGCTTAT
CGCTCCGAAG TAGTGGCAGA TATGAATCTG TATGGGGAAC TGCACCGCTT CTTACCAGCT
TTGGCTTACA TCGAAGGGGC AAGAATTACA GAAATTCCTG TACGACATCA TGCCCGACGC
TTTGGCCGCA GTAAATACGG CATTTGGCGG ACGTTTCGCG TCCTCATGGA TTTGTTAACT
ATCTCTTTCA TGAAGAAGTT CCTCACGCGC CCAATGCACG TTTTTGGCCT GTTAGGATTA
ATCTCCATGA TTTTAGGTAC AGGTATAGGC ATCTACTTAA CTTTCGTCAA GTTGGCTTTA
GGTGAAATGA TTGGCAATCG CCCTTTGTTG ATTTTGGCGG TACTATTACT GGTAACGGGG
GTACAGTTAT TCTGCTTTGG TCTTTTGGCG GAGTTACTGA TGCGTACATA CCACGAATCC
CAAGGCCGGC CAATTTATCG TGTGAGAGAA GTTGTAGCAA AAAATGGCAA CTAA
 
Protein sequence
MRNGVILARV NEGNESISAI IPNVSVVVPV HDEVESLPLL LEAIGSTLST SGLSYEIICV 
DDGSTDGSDA FLKEQARLRP DLKAVILRRN YGQTAAMAAG FNYALGEAIV TLDADLQNDP
EDIPILLAKL GEGYDLVSGW RHQRQDAAIS RLLPSKIANW LIGKITGVKL HDYGCSLKAY
RSEVVADMNL YGELHRFLPA LAYIEGARIT EIPVRHHARR FGRSKYGIWR TFRVLMDLLT
ISFMKKFLTR PMHVFGLLGL ISMILGTGIG IYLTFVKLAL GEMIGNRPLL ILAVLLLVTG
VQLFCFGLLA ELLMRTYHES QGRPIYRVRE VVAKNGN