Gene Ava_3318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3318 
Symbol 
ID3680252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4141653 
End bp4142021 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content44% 
IMG OID637718668 
Producttransposase IS4 
Protein accessionYP_323820 
Protein GI75909524 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00325519 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.351726 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTGAAAG TTGTTGTCAG TGAAGCCAAT GCGCCGGAAC GGGTACTTGC TGCCTACGCA 
TTAATGGAAC TTTTAGAGGA GCGTCCGGAA TTACTGGAAA AAGTTCAAGT CATGTGGGTT
GATTCCGGTT ACGACGGCGA TAAATTTGCT CTTTCAGTTT GGTTGATGAT CCAAGCACAT
GTTGAAGTCA TACGGCGTAC TGAGCAAGAA TTCCGGATTT TGCCCAAACG TTGGGTAGTC
GAAAGAACAT TTGGCTGGTT GAACCAATAT CATCGTCTCA GTAAGGATTA TGAGCATCTT
CCAGAGATGA GCGAAGCAGC TATATATGCT GTAATGACTA GGATTATGCT ACGTCGTCTT
GTATCCTAA
 
Protein sequence
MLKVVVSEAN APERVLAAYA LMELLEERPE LLEKVQVMWV DSGYDGDKFA LSVWLMIQAH 
VEVIRRTEQE FRILPKRWVV ERTFGWLNQY HRLSKDYEHL PEMSEAAIYA VMTRIMLRRL
VS