Gene Ava_3315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3315 
Symbol 
ID3680249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4139371 
End bp4140591 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content39% 
IMG OID637718665 
Producthypothetical protein 
Protein accessionYP_323817 
Protein GI75909521 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.05692e-12 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.429894 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATTA TAGAACTTTC CCTCAAGGCC AAGTCTGCTT GTCGTGCTTT AGTTGATGGT 
GAAGCACAGA TTTGGAATCT AACCTTGCCA GTATCAGAGC TTCCGCAAGG GTTGCCATTT
GGCCCAAATG CAAGAAATGC TAGTTTAGAA TCGAAGCCTG CAAGGGCTAT GTTAAAGACC
CTCGCAAAAG AGCCAGAAAA GTTTGTTTTT TACAATAGCG GTATAATGCT TATCGCCGAT
AAAATAAAAG CTCCCAGAGG CGAAGGTGGA GATTTTATAG TTCAGTTGGA TTTAAACATA
CCTAATACTG ACGACGAGGG AGACTTCCTT GGTCATGGCG TAATCAACGG TGGCCATACT
TATAAAGTTA TAATGCACGC ATTATATGGT CAGCATAAAT TTAGGGAATC TTACCCAAAT
GCTTCAAATG CTAATGTGCA GGTTTGTGTA GCTGTTGGTA TAGAAGAGGA TGAAATATCA
AAAATAAGTC ATGCCCGTAA TCTCAGCTTA TCAGTACCTG TCTACGCTTT AAAAAATTTG
GATCGGATTT GGAAGCCGAT AGAAGAGGCT CTACCGAAAG AATATCGTCA AAATGTTGTT
TTCAAACCTA ATGAAGACGG CGAATTTGAC GAAAGAGCCG ACTATGATGT AACTGATTTA
GTTCGTCGTC TTGCATTATT AAATAACAAA TTGTTTGACT TTAGGGAAGA CAAACACCCT
ATAAAAGCTT ATCAATCTCG TGGTAGCCTC GTTCAAGAAT GGGATGAACA AGACTACAAG
CAGGTCATAC CCTTACTGAA AGACATACTG TGGTTAGAAG AACAGATAAT CAAACAGCAT
GAAGTTATCA ATGGAAAAGC AACAATTAAA AAAGAAGCCG TAAATACGAA AGGAATAGGC
AAAAAAATTG TCATATCTAA AGTTAGCGGT TGTAAACCGA AACCAATGAA GTTAATCACT
GGTTATCAAA CAACTCAGCT AACTGTTGGA GACATTTTTT ATATGCCAGT TCTTGCAGCT
TTCCGTGTAT TTATTAAAGA TGGAAAATGG ATTAAACCTG TAGAGGAACT ATGGGACGAG
TGGGGAGTTA AGCTGGTTGA CCGTCTCTGG GATACATACA GAAATGAAGG ACGCAGTAGT
GCTTCCACTT TTGCACGTTC AAAATCTACT TGGTCAACTC TAACAAGTAT GGTTGCTTTA
CAATTTGTTC AGATAAAGTA G
 
Protein sequence
MQIIELSLKA KSACRALVDG EAQIWNLTLP VSELPQGLPF GPNARNASLE SKPARAMLKT 
LAKEPEKFVF YNSGIMLIAD KIKAPRGEGG DFIVQLDLNI PNTDDEGDFL GHGVINGGHT
YKVIMHALYG QHKFRESYPN ASNANVQVCV AVGIEEDEIS KISHARNLSL SVPVYALKNL
DRIWKPIEEA LPKEYRQNVV FKPNEDGEFD ERADYDVTDL VRRLALLNNK LFDFREDKHP
IKAYQSRGSL VQEWDEQDYK QVIPLLKDIL WLEEQIIKQH EVINGKATIK KEAVNTKGIG
KKIVISKVSG CKPKPMKLIT GYQTTQLTVG DIFYMPVLAA FRVFIKDGKW IKPVEELWDE
WGVKLVDRLW DTYRNEGRSS ASTFARSKST WSTLTSMVAL QFVQIK