Gene Ava_3289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3289 
Symbol 
ID3680320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4103433 
End bp4104296 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content43% 
IMG OID637718640 
Productdihydropteroate synthase 
Protein accessionYP_323792 
Protein GI75909496 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCAGTA AATTGATCAT AGGCGATCGC TGTTTCCACT GGGGACAGCG TACTTATTTA 
ATGGGTGTTT TAAATGTAAC GCCAGATAGT TTTAGTGATG GTGGTAAATT TAATACTACA
TCTGCCGCTT TAGCCCAGGC AAAAGCTCTG GTGGCTGCTG GTGCTGATAT TATCGATGTC
GGCGGTCAAT CTACTAGACC AGGAGCAGAG CAAATCACTC TGACAGAAGA ACTGGAGCGG
GTATTGCCAA TAGTCCAGAT ATTGCGATCG CAAATTCCTG TACCCATATC AGTGGATACA
ACTAGAGCAG AAGTAGCTAA AGCATCTATA GAAGCTGGAG CAAATATTAT TAATGATATT
TCTGGTGGCA CATTTGACCC CCAAATGTTG CCCACAGTGG CAACTTTTGG CGTACCAATT
ATATTGATGC ACATCCGTGG TACACCACAG ACTATGCAGC AATTTACTGA ATATCAGGAT
TTAATGGGAG AAATTTCTAG TTTTTTAGCT AACCAAATTA CCACAGCCAC AACCTTGGGT
ATTCAACCCG AAAAAATTAT CATTGATCCT GGTATTGGCT TTGCTAAAAA CTACGAACAA
AATTTAGAAA TACTACGCCG CTTAGGTTCA TTACGGGCGC TAAATTGTCC TATTTTAGTA
GGCGCATCCC GTAAAAGTTT TATCGGTCGA ATTTTAAATC AACCAGATCC CGAAGCACGA
GTTTGGGGAA CAGCTGCGGC TTGTTGCGCT GCAATTTTCA ATGGGGCTGA TATCCTGCGA
GTACATGATG TGCAAGAGAT GCGTGATGTA TCTCTAGTTG CTGATGCACT CTTTCGGGGT
GAGTTATTGA GTGCTGAGGA TTGA
 
Protein sequence
MCSKLIIGDR CFHWGQRTYL MGVLNVTPDS FSDGGKFNTT SAALAQAKAL VAAGADIIDV 
GGQSTRPGAE QITLTEELER VLPIVQILRS QIPVPISVDT TRAEVAKASI EAGANIINDI
SGGTFDPQML PTVATFGVPI ILMHIRGTPQ TMQQFTEYQD LMGEISSFLA NQITTATTLG
IQPEKIIIDP GIGFAKNYEQ NLEILRRLGS LRALNCPILV GASRKSFIGR ILNQPDPEAR
VWGTAAACCA AIFNGADILR VHDVQEMRDV SLVADALFRG ELLSAED