| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3287 |
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| Symbol | |
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| ID | 3680318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 4100694 |
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| End bp | 4102172 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637718638 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_323790 |
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| Protein GI | 75909494 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAACA CAGGTTCGCT GAAATTTCTA TCACAGCCAG CTGTGGGTGC AGCTTTGCTA
ACTGCTGCTC ATCTCGTTGT GCCGTTTGCC AGCGTAGCTC AGGGACAACA AGTATTTCCT
AATTCGCAAA CAGTACCTCC TAATAACCAA CGAGTATCAC CACCAGTACA AGTAGATACA
AAATACTTGT TGGGAGGCGG CGATCTAATT CGTGTAAATG TATTTGAAGT TCCCGAATAT
GGTGGTGAAT ACCAAATTCC TCCAGGTGGA GCTATCAACC TACCTTTAAT CGGCAGTGTT
TCAGTTCAAG GGTTCACGAC AGAACAAGCA GCCGATGTGA TCACTGACAG ATATCGCAGG
TATCTCAAAC GTCCCCAGAT TTCCGTCAAT CTTTTATCCC CTCGCCCCAT CAATATCTTA
GTTGCTGGAG AAGTCACACG CCCAGGCTCT TACACTTTGA GCTTGCAAGG CGGTGCAGGT
AATAATCCAG GGGTACAATA TCCCACTGTA TTGGCTGCAC TCACAACAGC CCAGGGTGTT
ACCTTAGCAG CAGATGTCAC TCAAGTGAAG CTGAGACGTA AAACCAGTAG TTCTACAGAG
CAAATCGTGA GCCTAAATTT GAAGGAACTC ATCCAAACTG GTAGCTCTTC ACAAGATATT
ACTTTAAGAG ATGGAGATGT TATAGTCGTG CCAACTGCTA CTAGCTTCAA CGTAGCAGAA
GCACGTAATT TATTTGCTGC TAACTTTGCT GCTAGCCAAA CAGCACCGCG CACAGTAGCC
ATTATTGGTC AAGTCAATCG TCCTGGCTCA TATCTTGTGA GTGCGGGGGC GACAGAAGCT
CAGGCTGGTG GGACTGGGGC TAGTGGCAGT GGTTTACCCA CGGTGACACG AGCAATTCAA
TTAGCTGGCG GTATTACCTC CCAAGCAGAT ATTACCAAGA TCAAATTACG CCGACCCACA
AGGACTAATG GCGAGCAAGG TATAGACCTA AATCTTTTGG AATTATTACG TAGTGGTGAT
GTTAATCAAG ACGTAATTGT CCAAGATGGA GACACAATTG TCATTCCTAC TGCTACTGAG
GTTAACCCAG CACTAGCGAC GGAATTAGCA ACTACTACCT TGTCGCCTAA TACAATTCAG
GTTGGTGTGG TGGGTGAAGT TAAACGCCCA GGAGCCGTAG ACATTAGACC AAATAGCTCC
TTAAACCAAG CACTACTCGC GGCTGGTGGA TTTAATGACG CTAGAGCGCG TAGCGCCAGT
GTGGAGTTGA TTCGTCTCAA CCCCAATGGT TCAGTGACAA AGCGTGAAGT AAAAGTTGAC
TTCAACCAAG GAATTAACGA AGAGACTAAT CCCATACTCC GGAATAATGA TGTTGTGGTA
GTTGGTCGCT CTAATATAGC TAGAACGGGT GATACGCTGA ATATAGTAGC CGGCCCTCTT
GGTATAATCT TTAACTTCTT AAGATTTTTC GGACTTTAA
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| Protein sequence | MLNTGSLKFL SQPAVGAALL TAAHLVVPFA SVAQGQQVFP NSQTVPPNNQ RVSPPVQVDT
KYLLGGGDLI RVNVFEVPEY GGEYQIPPGG AINLPLIGSV SVQGFTTEQA ADVITDRYRR
YLKRPQISVN LLSPRPINIL VAGEVTRPGS YTLSLQGGAG NNPGVQYPTV LAALTTAQGV
TLAADVTQVK LRRKTSSSTE QIVSLNLKEL IQTGSSSQDI TLRDGDVIVV PTATSFNVAE
ARNLFAANFA ASQTAPRTVA IIGQVNRPGS YLVSAGATEA QAGGTGASGS GLPTVTRAIQ
LAGGITSQAD ITKIKLRRPT RTNGEQGIDL NLLELLRSGD VNQDVIVQDG DTIVIPTATE
VNPALATELA TTTLSPNTIQ VGVVGEVKRP GAVDIRPNSS LNQALLAAGG FNDARARSAS
VELIRLNPNG SVTKREVKVD FNQGINEETN PILRNNDVVV VGRSNIARTG DTLNIVAGPL
GIIFNFLRFF GL
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