Gene Ava_3273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3273 
Symbol 
ID3680304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4078545 
End bp4080875 
Gene Length2331 bp 
Protein Length776 aa 
Translation table11 
GC content42% 
IMG OID637718624 
Producthypothetical protein 
Protein accessionYP_323776 
Protein GI75909480 
COG category[V] Defense mechanisms 
COG ID[COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.246841 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAG CCATTGACAA GAAATCTTTG AGTGAACGTG ACATTTGTAC AAAGTACATT 
ACACCTGCTC TAACTAGTCG GGGCTGGAAT ATTAACACTC AGATTCGCGA GGAAGTGACG
CTGACAAAAG GTAGGGTGAT TGTTAGGGGT AAGCTGGCTA GTCGAGGTGA GCAGAAACGC
GCTGATTATG TGCTGTATCA CAAACCCGGT GTACCACTGG CTGTAATTGA GGCTAAAGAC
AATAATCACT CTGTCAGTGC GGGAATGCAG CAAGCGATCG CTACTGGTGA ATTAATTGAT
GTACCATTCA TCTTTAGCTC GAATGGCGAC GCTTTTATGA TGTGCGACTG CACAATTAGC
GAGGGACAGC GAGAGCGAGA AATCCCCCTT GACCAGTTCC CGACACCGCA GGAACTTTGG
CAAAAATACT GTGATTTGAA GGGAATTAAC TCCGACATTC AGCCGATTGT TGCTCAAGAT
TACTATCCTA GCCCTGATAA GAAACAGCCA CGCTATTATC AACAGATTGC CATTAACCGG
ACAATTGAAG CGATAGCTAA AGGAGAAAAC CGCATTCTGT TAGTGATGGC GACGGGTACG
GGTAAAACTT TTACAGCTTT TCAAATTATT TGGCGGTTGT GGAAGTCGGG GGCGAAAAAG
CGTATTCTGT TTTTGGCAGA CCGCAACATT TTGGTTGATC AAACTAGAGT TAATGACTTT
AAACCCTTTG GCTCAAAAAT GACCAAAATT AAGCAGCGAC AGATAGATAC ATCTTACGAA
ATTTATCTCT CCCTATATCA GGCGGTAACG GGAAATGAAG AGGCGAAAAA CATTTATCGG
CAATTTTCAC CAGGTTTTTT TGACTTAATT ATTATAGATG AGTGTCATCG AGGAAGCGCA
TCTGAGGATT CTGCATGGCG AGATATTTTG GAATATTTTA GCAGTGCAAC GCAGATTGGC
TTGACTGCTA CCCCAAGGGA AACAGAAGAA GTTTCTAATA GCCTTTATTT TGGTGAGTCA
ATTTTTACCT ATTCACTCAA ACAAGGGATT GAAGATGGCT TTTTAGCTCC CTACAAAGTT
ATTCGCATTG ACTTTGATAA AGACTTGAGT GGATGGAAAC CCAAGCCAGG ACAACGGGAT
AAATATGGTA AAGAAATTCC CGACCAAATA TTTAATCAGC GAGATTTTGA TAGAACTTTG
GTTTTAGAAA AGCGGACTGA GTTAGTTGCG CGGATTATTT CTGATTATCT CAAATCAAGC
GATCGCTTTG CCAAAACTAT CATTTTTTGT GAGACGACTG ACCACGCAGA ACGAATGCGG
GTAGCGTTGG TGAATGAGAA TGCTGATTTG ATGGCGGAGA GTAGCCGCTA CATTATGCGA
ATTACTGGGG ATGATGCTCA GGGTAAGGCA GAATTGGATA ATTTCATTGA CCCTGAAAGT
AAATATCCCA CAATTGTTAC TACCTCTGAG TTGCTGACGA CGGGTGTTGA TGCTAAAACC
TGCAAGTTGA TTGTTTTAGA CCAGCGCATC CTGTCCATGA CTAAATTTAA GCAAATTGTT
GGTCGCGGTA CTCGCATTGA TGAAGACTAT GGCAAAATGT TCTTCACCAT TATCGATTTT
AAGAAAGCAA CACAGTTATT TGCTGACCCT GATTTTGATG GTGAACCTGT ACAAATTTAT
CAGCCTAAGC CAGTTGATCC AATTGTTCCG CCCGATAATG GAGACGATGA GGTAGTCATT
GATGGTGAGA TTACCCGCAA GCAAAAGCGG GAGAAGTATG TAATTGCGGA TGAAGAGGTG
GCGGTTGCTT TTATTCGAGA GCAATACCAC GGCAAGGACG GTAAGCTGAT TACGGAATCG
ATTAAGGACT ATACTCGCAA AACAGTTAGT CAGGAGTATG CTTCATTAGA TGCGTTCTTG
AAGAAATGGC ACTCTAGCGA GCAGAAGCAG GCTATTATCC AAGAGTTACA AGAGATGGGC
ATACCTTTGG AAGCGTTAGA ACAAGAGATT GGTAAGGATT TTGACCCATT AGATTTAATT
TGTCATGTTG TCTTTGACCA ACCGCCACTA ACTCGCAAAG AAAGGGCGAA CAATGTCCGC
AAGCGTAATT ACTTTAGTAA GTATAGTGAA CAGGCTCGTA AGGTAATAGA TGCGCTTTTG
GATAAATATG CGGATGAAGG GATTGAAGAT ATTGAAAAAT TGGATGTGCT GAAGGTTCAT
CCTTTTGATA AAGTGGGTAC ACCAATAGAA ATTATTCAGC TTTTTGGCAG TAGAAAAGAA
TATCTTAATG TACTTCAGCA GCTAAAAACG CAACTTTATG AGATAGCCTA G
 
Protein sequence
MSEAIDKKSL SERDICTKYI TPALTSRGWN INTQIREEVT LTKGRVIVRG KLASRGEQKR 
ADYVLYHKPG VPLAVIEAKD NNHSVSAGMQ QAIATGELID VPFIFSSNGD AFMMCDCTIS
EGQREREIPL DQFPTPQELW QKYCDLKGIN SDIQPIVAQD YYPSPDKKQP RYYQQIAINR
TIEAIAKGEN RILLVMATGT GKTFTAFQII WRLWKSGAKK RILFLADRNI LVDQTRVNDF
KPFGSKMTKI KQRQIDTSYE IYLSLYQAVT GNEEAKNIYR QFSPGFFDLI IIDECHRGSA
SEDSAWRDIL EYFSSATQIG LTATPRETEE VSNSLYFGES IFTYSLKQGI EDGFLAPYKV
IRIDFDKDLS GWKPKPGQRD KYGKEIPDQI FNQRDFDRTL VLEKRTELVA RIISDYLKSS
DRFAKTIIFC ETTDHAERMR VALVNENADL MAESSRYIMR ITGDDAQGKA ELDNFIDPES
KYPTIVTTSE LLTTGVDAKT CKLIVLDQRI LSMTKFKQIV GRGTRIDEDY GKMFFTIIDF
KKATQLFADP DFDGEPVQIY QPKPVDPIVP PDNGDDEVVI DGEITRKQKR EKYVIADEEV
AVAFIREQYH GKDGKLITES IKDYTRKTVS QEYASLDAFL KKWHSSEQKQ AIIQELQEMG
IPLEALEQEI GKDFDPLDLI CHVVFDQPPL TRKERANNVR KRNYFSKYSE QARKVIDALL
DKYADEGIED IEKLDVLKVH PFDKVGTPIE IIQLFGSRKE YLNVLQQLKT QLYEIA