Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3255 |
Symbol | |
ID | 3680404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4055043 |
End bp | 4056107 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637718606 |
Product | TPR repeat-containing protein |
Protein accession | YP_323758 |
Protein GI | 75909462 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4235] Cytochrome c biogenesis factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00360912 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCAAAATC AGCCACCATT TATAATCAAT TCAACTTACC ATCGAGAGGA GAGTAAAGAT ATTGAATTTA AGAGTATAGC ATCACAACAT CCTGTTAAAA AAATTGTAAA TCATGCAGAG GAATATATAA CTGGATTTCT TAACGCGCTA GTAGAAGGTC AACTATATAT AGGTATAGAT GATGCTGGAA AAATTTTAGG TGTTAAACTT AGCAGGAGCG AGCGAGATGA AATTCAAAAA ATCATCCCCA ATAAACTCAG AAATACAGAC CCAATAGTTT CTCCATCGCT TTATGATATT GCATTCTACA ATGTTCTTAA CGAAGAACAA AAAGACATTG AAGATTTGTT TGTTGTAAAT ATAAGTGTTT TAGGAGTAGA TGAAAGCCAA TTTTATAGAA CATCAAGCCG TGAGTATTTT CTATACAAAA CAACAGGAGG TAGTACTTAT CTTAAAACAG GAACAGACTG CATTAAGCTG AATACCACAG AAATAGCACA AGAAATTCAA AAGCGTAAAC AAAAGTATTT AAAGCAAGAG TTAGACAATA TCGACGATAA ACTTTTACAA AATCCAGATA ATCGTTCTCT TCTCAAGGAA AAAGCCAACA TAGCAAAACT GATGGGTGAT ATTGAGAAAA TGGATGAAAG TTATAAAAGG CTAATCAATC TTAACCCTAA CAATTCTAGA ACAAGGGTTG ATTATGCCTC TGCACACAAA AGTATAGGTG ATTTAGAGGG TGCATTAGAT ATCCTTGAAG ATGCTCTTAA GGTAGACGGA GATAATCTGA GCATATTAAA AACAAAAGGA GAAATACTGT TAGGCTCAGA TAGCTCAGAT AAGGTTAAGG AAGCTTTTCA AACTTATGAA ACTGCATTGA AATTGAATCC AGAAGACTAT ACTATCATTA CCCAAATTGG GATTGCATTA AGAAAATTAG GTAAATATAA GGAATCTATC AAAGTTTTTA ATTTAGCTCT GGCAAAGTCT CCTCATTATA GAGCAGCAAA ATATGAAAAA AGAATAACTT ATCATAAGAT GTTTGAAGGC GGTATCAGAA TATAA
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Protein sequence | MQNQPPFIIN STYHREESKD IEFKSIASQH PVKKIVNHAE EYITGFLNAL VEGQLYIGID DAGKILGVKL SRSERDEIQK IIPNKLRNTD PIVSPSLYDI AFYNVLNEEQ KDIEDLFVVN ISVLGVDESQ FYRTSSREYF LYKTTGGSTY LKTGTDCIKL NTTEIAQEIQ KRKQKYLKQE LDNIDDKLLQ NPDNRSLLKE KANIAKLMGD IEKMDESYKR LINLNPNNSR TRVDYASAHK SIGDLEGALD ILEDALKVDG DNLSILKTKG EILLGSDSSD KVKEAFQTYE TALKLNPEDY TIITQIGIAL RKLGKYKESI KVFNLALAKS PHYRAAKYEK RITYHKMFEG GIRI
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