Gene Ava_3248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3248 
Symbol 
ID3680592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4039478 
End bp4040728 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content36% 
IMG OID637718599 
Producthypothetical protein 
Protein accessionYP_323751 
Protein GI75909455 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.38215e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.26381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTAACT TCAGTGAATT GATTGCCATT ATTAAACGTA TTGCTAAAGG TGAAGCAGTA 
CAAACTGATA TATCAAATGT CATTAGTACA CTAACGAATC TTGGAGTAGA AGCAGATGAC
ATACAAAAAT TCACATCAAT ATTAAATGCA GATAGGCAGC AAGTCTATCA AATTGTCTTT
CAATTAGGAA AATATAATTC CAACATTGGA CAAGCCAAAG GTAATCAATT CGATATCCAC
GACGGCATAA GTTCAGAAGA AATTAAGGAA GTTTTGCGAG AAGTATTACA AGAGTTTTTT
AGTAACACAA GTATTGGTAT ATCAGCTAAA AATTTACCAG CAGTTGATTA TGAGATAACT
GAAAGGCGAG AACGCACAAA TTCAGAAATA TCTCAATATT TACCTACATC AGAACTGCCA
GCTATTTCAA CCTTCGATTT TGAAACGATA ACAGTAGGTA AGCAGGGAAA CATTACTAGA
CGTTCTATTA AACAAGCAGA ATACTTTGTA GAATATTTAA ACAATGGTGT TGAACTAGAA
ATGGTTTCTA TACCTGGTGG CTCATTTACA ATGGGCGCAT CTAAAGACGA ATCTGGTACA
ATTGAAGATG AACGACCTCA ACATTTAGTT ACTCTTAAAC CATTCTTTCT GGGTAAATAT
CCTATTACTC AAGCACAGTG GCAAGAGGTT GCGAATTTTC CAAAAATCAA ATACGAACTT
GAATCTGAGC CATCATATTT TAAAGGAGAT AACTTACCTG TAGAGTGTAT TTCTTGGTAT
GAAGCACAAG AATTTTGTGC TAGACTCTCA CAGAAAACAG GACGAGTCTA TCGTTTACCT
AGTGAAGCAG AATGGGAATA TGCTTGTCGT GCTAACACAA CATCTTCATT TTATTGTGGT
GCAATAATTA CGAGAGATTT AGCGAATTAT GGTGAGGAAC AACAAACACA TTTTCGTGTG
AGTCAAACAA GTGAAGTCGG AATTTTTCCT GCTAATAGCT TTGGATTATA TGATATGCAC
GGTAATGTTT GGGAATGGTG CGCTGACTAT CAACATGAAG ACTATCAAGA CGCACCATCA
GATGGTAGTG TATGGATAAT AGATGGGAAT CCAGAATATA GAATGCTTCG GGGTGGTGCT
TGGGATTATG ATTTTAGTTA TTGTCGTTCT GCATCTCGCT ATTTTGAAAA TCCCAGTACA
CGCAATGAAT CATTTGGTTT TAGAGTAGTG TGTTGTCTTG ACAATGCCTA A
 
Protein sequence
MSNFSELIAI IKRIAKGEAV QTDISNVIST LTNLGVEADD IQKFTSILNA DRQQVYQIVF 
QLGKYNSNIG QAKGNQFDIH DGISSEEIKE VLREVLQEFF SNTSIGISAK NLPAVDYEIT
ERRERTNSEI SQYLPTSELP AISTFDFETI TVGKQGNITR RSIKQAEYFV EYLNNGVELE
MVSIPGGSFT MGASKDESGT IEDERPQHLV TLKPFFLGKY PITQAQWQEV ANFPKIKYEL
ESEPSYFKGD NLPVECISWY EAQEFCARLS QKTGRVYRLP SEAEWEYACR ANTTSSFYCG
AIITRDLANY GEEQQTHFRV SQTSEVGIFP ANSFGLYDMH GNVWEWCADY QHEDYQDAPS
DGSVWIIDGN PEYRMLRGGA WDYDFSYCRS ASRYFENPST RNESFGFRVV CCLDNA