Gene Ava_3213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3213 
Symbol 
ID3680633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3994814 
End bp3995950 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content49% 
IMG OID637718563 
Productphosphoribosylformylglycinamidine cyclo-ligase 
Protein accessionYP_323716 
Protein GI75909420 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0150] Phosphoribosylaminoimidazole (AIR) synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAG CACTCGATCA AGTCGATTAC AATACTCTCG ATGCGGCCAA GCTTCGCTTT 
ATTGAGGCCG CAAAACGTAC ATTGCAGTTT TCACCCGCCT ATGGGAAAGT ACCTCTTTCC
GGGCTGGGGG GCAGTGCTAA CGCCTTTAGT TTCAACCTAG CGCCTTACTT GCAGACGGGA
ACACCAGAAC TTTTTGTGAG TCTTGTTCCT GAAGGTCTGG GTACTGCTGA TGATGCCCGT
CCTGATGACC TCTCGGAGGA AGAATTGCGA CAGTTTTGGT GGAACATTGG TATCAAGATT
CTCTCGTGTC TGACCAATGA TGCTGCATCT TCGGGGATGC AAACGGTACT TCTGGGATTG
TATTTACCCT CAAGTACCCC GGAAACCGTC TTCACCCCTG CCTTTTTGGA TGGGTTTCTC
GATGGTGTAG TTGAGGGATG CAAACGAATT GGCTGCGTTT ATATTTCTGG GGAAACGCCA
CAACTCAAAA CCAAGATGAT TCCAGGGCGG CTGGATATTG CCGGTTCTGT ATTTGGTGTC
ATGCCTCCTG GTGTGGCTCC TATTGATGGT ACACGGTTGG CTGAAGGCAA TGCGATCGTG
TTGGTGGAAA GTACCGGACT CCATGAAAAT GGCTTTACCC CGGTGCGGAA ACTAGCCGAA
TCACTCCCCG ATGGCTACAG AACAAAACTA CCCAGTGGGC AGGAGTTATG GGCAGCGATG
AATGCTGCCT CTCATCTCTA CACGCCACTG GTGCAAGCGG TGTTGAGTGA GGGTATTCGT
CCCACCGCAA TGGAGAATAT CACCGGTCAT GGATGGCAGA AACTTATGCG GTCAGCCAAA
CCACTACGGT ATGTGATTGA AAAATTGCTA CCAGTTCCCG AAATCTTTCA GTTTGTCGAA
AGTCAACTAG AAGGCGGGAA AGAAATGATG CTTTCCGTGT TCAATTACGG TGCAGGGTTT
GCATTTTATA CAGAAACAGA ACAAGATGGA GAGAGAATTG TTCAGCTAGC AAAAGAGCAA
GGATTAACAG CTGCGATCGC TGGTAGAGTG GAAGCATCCC CCACCCGTGA AGTTGTCATC
ACCCCATTTA ACATCACATT AAAGGGAGAG TCTTTCGGCA TCGCCAAAGG CGCATAG
 
Protein sequence
MTQALDQVDY NTLDAAKLRF IEAAKRTLQF SPAYGKVPLS GLGGSANAFS FNLAPYLQTG 
TPELFVSLVP EGLGTADDAR PDDLSEEELR QFWWNIGIKI LSCLTNDAAS SGMQTVLLGL
YLPSSTPETV FTPAFLDGFL DGVVEGCKRI GCVYISGETP QLKTKMIPGR LDIAGSVFGV
MPPGVAPIDG TRLAEGNAIV LVESTGLHEN GFTPVRKLAE SLPDGYRTKL PSGQELWAAM
NAASHLYTPL VQAVLSEGIR PTAMENITGH GWQKLMRSAK PLRYVIEKLL PVPEIFQFVE
SQLEGGKEMM LSVFNYGAGF AFYTETEQDG ERIVQLAKEQ GLTAAIAGRV EASPTREVVI
TPFNITLKGE SFGIAKGA