Gene Ava_3197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3197 
Symbol 
ID3680617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3973691 
End bp3975595 
Gene Length1905 bp 
Protein Length634 aa 
Translation table11 
GC content37% 
IMG OID637718547 
ProductZn-dependent protease with chaperone function-like 
Protein accessionYP_323700 
Protein GI75909404 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value5.40143e-06 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCTACAA CAGGAAGCCA AGAGCGTTTT GATGGGTTAA TTCAGAAGTT AGAAATCTTC 
GCCAACAAAC AGCCACGTCT TTATAGGTTG CAGGTTGCTT TTTTAGCTAC TTTGGGTTAT
GCCTACATCT TGTTAATTTT GGCTGTGGCG GTGGCTTTGT TGGTGGGTAT TGTGTTGTTG
ATGTTAAACG CCCAGAGAAT TTCTGCTTCA GTCATCAAAG GCGGGTTATT TCTAGTAGCG
TTTGTATTCA TATTACTGCG ATCGCTTGCG GTTTCTCTGC CTCTACCATC TGGGTTATCT
TTAAAAGTCC AAGATGCACC AAAACTCTAT AGTGTAGTTA ACGAGGTTGC ATCCCAACTC
AAAGCGCCAC GATTTCACCA CATTCTCTTA ACAGATGATT TTAATGCGGG TGTTGTGCAA
AGACCGCGTT TAGGTTTGCT GGGATGGTAC CGCAATTACT TGATTGTCGG TCTTCCCTTG
ATCTTAGCAT TATCACCAGA GCAATTTCGT GCTGTTCTCG CCCACGAATT AGGACACTTA
TCAGGAAATC ACAGTCGTTT CAGTGGTTGG ATTTATCGGC AACGACAGAC ATGGTATCGT
ATTATACAAG ATTTAGGACA AGATGGTAAT CAATTATCTT GGTTAATTTT TGAATGGTTT
TTGAAGTTAT ACGTTCCTTT TTTTAATGCT TATTCTTTTG TTTTAGCTCG CAGAAATGAG
TATGAAGCTG ATAGATGTGC TGTGGATATT ACCGGAGTAC AAAATACAGC AGAAACTTTA
ATTAATGTTG GGGTAAAGTA TAGATTTTTA GAAAATAATT TTTGGTCTAA TGTGTATAAA
CAGGTGCAAA CAGAAGTGGA ACCACCCATC ACAGCATATA CACAGATGGA GAAGACATTT
TTGCAAATAA TAGATAAACC AATAGGAAAT TTATATTTAC AAGCTTCTTT CGCAGAGGAG
ACTGATAACG CAGATACTCA TCCCTGTTTA AAAGATAGGT TGAAAGCTTT AGGCTATATT
CCCTATGGTG AAGAAGATAT GGTTATTGAT ATGTCTATTA CTAAGAGTGC CGCTAGTGAA
TTTTTAGGAG AATATTTACC AGACTTTTTA GACTATTTCA ACAAATCTTG GCGAGAACGA
GTAGCCGCAC CTTGGCAGGA AAAATATACA GCAATTCAAT CATCAAAAAA TGTATTAACA
AGATTAGATG AGAAAGCGCA GAATAATCAA CTTACTCTTG ATGAATCTTT CGAGAGGGCT
TACTTAACAT TAGATTTTGT GAGTGAAACA GCCGCTTTAC CTTTATTAGC AGATATCTTA
TCCCAAGAGC CGCATCATGT CTCTGCTAAT TATCTACTAG GACAGCTATT ATTAAGGCAA
GCAGATACCA AAGGTATAGA ACATATCGAA AGAGCGATCG CCAAAGATCA AGGTATTCTC
ATCGAAGGCT GTCAGATCAT TTATCAATTC TTACAACAGC AAGGAAATAT TGAGCAAGCA
GACTCATATC TCAAACGGGC TGAGGAACAT TATAAACTAC TCTTACAAGC AAAAGCAGAG
CGCTCACAAA TAAGAGTAAA TGACGAATTA TTACCTCATG GTTTTTCAGA CTCAGAAATT
CATCAATTGT GTGAACAGTT ATCTCCATAT CCTAACGTCA AGAAAGCTTA TTTAGTGCGG
AAAGTAGTAC AAATTTTTCC AGAAAAGCCA CAATACATTT TAAGTATTAT TCGCCAAGTA
GGTTTTTGGA AAAATAATTC TGATGAGGAA AACTCTCAAC TTGAAAATGC TCTATCGCAA
AACTTAAATT TTTCCTACCG ACTATTTATT GTTGTTTTGA ATGACTATAT AAGAATTGAG
AAAAAATTGC AGAAAATACC CAATGCAATG ATTTTCCAGC GCTAA
 
Protein sequence
MSTTGSQERF DGLIQKLEIF ANKQPRLYRL QVAFLATLGY AYILLILAVA VALLVGIVLL 
MLNAQRISAS VIKGGLFLVA FVFILLRSLA VSLPLPSGLS LKVQDAPKLY SVVNEVASQL
KAPRFHHILL TDDFNAGVVQ RPRLGLLGWY RNYLIVGLPL ILALSPEQFR AVLAHELGHL
SGNHSRFSGW IYRQRQTWYR IIQDLGQDGN QLSWLIFEWF LKLYVPFFNA YSFVLARRNE
YEADRCAVDI TGVQNTAETL INVGVKYRFL ENNFWSNVYK QVQTEVEPPI TAYTQMEKTF
LQIIDKPIGN LYLQASFAEE TDNADTHPCL KDRLKALGYI PYGEEDMVID MSITKSAASE
FLGEYLPDFL DYFNKSWRER VAAPWQEKYT AIQSSKNVLT RLDEKAQNNQ LTLDESFERA
YLTLDFVSET AALPLLADIL SQEPHHVSAN YLLGQLLLRQ ADTKGIEHIE RAIAKDQGIL
IEGCQIIYQF LQQQGNIEQA DSYLKRAEEH YKLLLQAKAE RSQIRVNDEL LPHGFSDSEI
HQLCEQLSPY PNVKKAYLVR KVVQIFPEKP QYILSIIRQV GFWKNNSDEE NSQLENALSQ
NLNFSYRLFI VVLNDYIRIE KKLQKIPNAM IFQR