Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3186 |
Symbol | |
ID | 3680665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3956580 |
End bp | 3959144 |
Gene Length | 2565 bp |
Protein Length | 854 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637718536 |
Product | DNA mismatch repair protein MutS |
Protein accession | YP_323689 |
Protein GI | 75909393 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0251089 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCTT CTGACATTCA GCCGACGGAA CCCCATACTC CCCCAACCCC TCACGCCGAC ACTCGACTGG TAGACCGCAC TAAGCTGAGT AAGATGTATC AGCATTATGT TGAGGTGAAA GATAAGTATC CTCATGCGTT GTTGTTGTAT CGGGTGGGTG ATTTCTTTGA AACGTTTTTT CAAGATGCTG TCACGGTAGC TAGAGAATTA GAATTAGTCC TGACAAGTAA ACACGGTGGC GAAGTTGGAC GGGTAGCCAT GACTGGTGTT CCTCACCATG CTTGGGAACG CTACACTACC CAATTGGTGG AAAAAGGTTA TGCTGTGGTG ATTTGCGACC AAGTAGAAGA TGCTTCCGAG GCTGTGGGTT TGGTGCGGCG GGAGGTGACG CGCATCCTGA CTCCCGGCAC TTTGCTCGAA GAGGGAATGC TCAAATCAAG TCGCAATAAT TACTTAGCAG CTGTGGTAAT TACGAGCAAT CATTGGGGGC TAGCCTATGC AGACATCTCC ACCGGGGAAT TTTTGACAAC TCAAGATAGT GATTTAGAAC GGTTGACCCA GGAATTGATG CGGTTGCAAC CTTCAGAAGT ATTGGTTCCC ACCAACGCCC CAGATTTGGG TACATTGCTG CGTCCGGGGG AAACTTCACC ACACCTTCCA GAATGTTTAC CACCATCATT TTGCTATAGC TTGCGATCGC AACAACCATT CTCCCAGGCC GAAGCTAGAA GTACATTATT GCAGAGATTT AAAGTGCGAT CGCTGGAAGG TTTGGGTTGC GACCATCTCC CCTTGGCTGT GCGCGCGGCT GGTGGGTTGT TGGAATATGT GGAAGATACC CAAAAAGCTG GACAAGTATC CCTGCAAAGA CTCCGCACCT ATACCATTAC CGATTATCTA ATTGTTGATA ACCAAACCCG CCGCAATTTG GAAATTACTC AAACAGTTCG TGATGGTACT TTTCACGGTT CCTTACTATG GGCATTAGAT AAAACTAGCA CGGCGATGGG TAGTCGGGCT TTGCGGCGAT GGCTATTACA ACCGCTACTG GATATTAAAG GGATTAGTTC ACGCCAAGAC ACCATCCAAG AATTAGTCAC AAATACTCGA CTACGGCAAG ATTTACGGCA TTTGTTACGC CAAATTTACG ACCTCGAAAG GCTAACGGGT CGGGCTAGTT CGGGGACTGC AAATGCTAGA GATTTAGTCG CCTTGGCTGA TTCCCTCTCC CGTTTGCCAG AATTAGCCAA CTTAGTCATT GATGCTCATT CGCCTTTCCT CAAGGCTTTG CAAAAAGTAC CGCCAATTTT AGAAGAACTG GCACAAAAAA TACACGCTCA TCTGGTAGAA TCACCACCAT TACATCTCAA AGAAGGGGGC TTGATTCGTC CTGGTGTCAA TCCTTTATTG GATGAAAGAA AAGCGACCGT CGAAGCAGAC CACCAATGGA TTGCTAATTT AGAAGTGGAT GAAAGGGCGA GAACGGGAAT CCCTTTGCTG AAGGTGGGAT TTAACGAAAC CTTTGGCTAT TACATTAGTA TTTCCCGCGC CAAAGCTGAC CAAGTACCCG CCAATTACAT CCGCAAGCAA ACCCTGAAAA ATGAGGAACG TTACATCACC CCGGAATTGA AGGAAAGGGA AGCCAGGATT CTCACAGCGC GGGATGATTT ACATAAGTTG GAATATGAGG TTTTTGTCAC CTTACGGGAA GAAGTAGGAG AACAGGCGGA AGCAATTCGC CACCTTTCCC GCGCCGTAGC CGCCGCCGAT GTGTTGTGTG GTTTAGCTGA GTTGGCGGTT TATCAAGGTT ATTGTCGTCC CGAAATGGTG AATGGACGAG AGATAGCAAT TATCGATGGT CGCCATCCGG TAGTGGAACA GTCCTTACCT GCGGGGTTCT TTGTGCCAAA TTCCACCCAG TTGGGGAGTA ATGAAGAAAC CCACCAACTT CCTGACTTAA TTATTCTAAC TGGACCAAAT GCCAGTGGTA AAAGTTGTTA CCTGCGTCAA GTGGGTTTAA TTCAACTAAT GGCGCAGATT GGCAGTTTTG TTCCGGCTAA ATCTGCTAGG TTGGGAATAT GCGATCGCAT TTTTACCCGC GTTGGTGCAG TGGATGATTT AGCCACAGGT CAATCTACAT TTATGGTGGA GATGAATGAG ACAGCAAATA TTCTCAATCA TGCCACATCT AGATCCCTAG TTTTATTAGA TGAAATTGGT AGAGGAACCG CTACTTTTGA CGGTCTTTCC ATCGCTTGGG CGGTTGCAGA ATATATCGCC ACCGAGATTC GTTCCCGGAC AATTTTTGCC ACTCACTACC ATGAATTAAA CGAACTGGCG GGAATGTTAC CAAATGTGGC TAACTATCAG GTGACAGTGA AAGAATTACC AGACCAAATT ATCTTTCTGC ACCAAGTCCA ACCAGGAGGC GCTGACAAGT CCTACGGTAT TGAAGCGGGA AGGTTAGCGG GTTTACCAAC CGTAGTCATT CAACGGGCGA AACAAGTCAT GGGGCAAATT GAGAAACATA GTAAGATTGC GATGGGATTG CAAAATTTGG ATTAA
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Protein sequence | MTASDIQPTE PHTPPTPHAD TRLVDRTKLS KMYQHYVEVK DKYPHALLLY RVGDFFETFF QDAVTVAREL ELVLTSKHGG EVGRVAMTGV PHHAWERYTT QLVEKGYAVV ICDQVEDASE AVGLVRREVT RILTPGTLLE EGMLKSSRNN YLAAVVITSN HWGLAYADIS TGEFLTTQDS DLERLTQELM RLQPSEVLVP TNAPDLGTLL RPGETSPHLP ECLPPSFCYS LRSQQPFSQA EARSTLLQRF KVRSLEGLGC DHLPLAVRAA GGLLEYVEDT QKAGQVSLQR LRTYTITDYL IVDNQTRRNL EITQTVRDGT FHGSLLWALD KTSTAMGSRA LRRWLLQPLL DIKGISSRQD TIQELVTNTR LRQDLRHLLR QIYDLERLTG RASSGTANAR DLVALADSLS RLPELANLVI DAHSPFLKAL QKVPPILEEL AQKIHAHLVE SPPLHLKEGG LIRPGVNPLL DERKATVEAD HQWIANLEVD ERARTGIPLL KVGFNETFGY YISISRAKAD QVPANYIRKQ TLKNEERYIT PELKEREARI LTARDDLHKL EYEVFVTLRE EVGEQAEAIR HLSRAVAAAD VLCGLAELAV YQGYCRPEMV NGREIAIIDG RHPVVEQSLP AGFFVPNSTQ LGSNEETHQL PDLIILTGPN ASGKSCYLRQ VGLIQLMAQI GSFVPAKSAR LGICDRIFTR VGAVDDLATG QSTFMVEMNE TANILNHATS RSLVLLDEIG RGTATFDGLS IAWAVAEYIA TEIRSRTIFA THYHELNELA GMLPNVANYQ VTVKELPDQI IFLHQVQPGG ADKSYGIEAG RLAGLPTVVI QRAKQVMGQI EKHSKIAMGL QNLD
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