Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3159 |
Symbol | |
ID | 3680715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 3920488 |
End bp | 3921915 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637718508 |
Product | periplasmic sensor Signal transduction histidine kinase |
Protein accession | YP_323662 |
Protein GI | 75909366 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.234303 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTCAAG CTACTCGTCG TCGTCTGGCT ATTTGGTACA CTGCGGTAAC TGCGGTATTG TTGCTGTTGT TTGCCAGTGG TGTGTATTTA TATGTCCGTA GTACATTGGT GGAACGGATT GACGATACTC TTAGTCATGT GGTGGAAATT GTAGAGCGAT CGCTGGTCAT TGAACCAGTG AACGGTGAGC CTGAGAAGCT ACGCATTAAC GTAGAAGCCA GTTTTCGCAA CAATGCCAAT ACTGTAGAAG ATGATCATAT TGATCTAGAG TGGTTTAGTC CTACTGGTGA CTTAATCTGG TCAACTTTTT CTGAACCTTT AAATATTCCT ATTCACAGTA ACCGCACAGG TGAAACTGTT CACGTTTTTA AGCAAGACAG ATGGACAAAC TCAAAAACGC AAAACTCAGC ACTCACCAAT CAAGATTCAG GACTATTATT GCGACAAGTT ACACAACGAG TGGAATTTGG ACGGCAAGTT TTGGGATATC TGCGTGTGAG TCATCCTTGG TTTGAAGTGA CTAAACCGAG TCGCCAGTTA ATTTTTGATT TGGCGCTGGG AACTGGGTTA ATGGTGATTT CTGTTGCCGC CAGTGGGTGG TTTCTCTCAG GTAAAGCAAT GGAACCAGTT GGTGAATCTT ACCAACGTCT CAAGCAATTT ACTGCGGATG CTTCCCATGA ACTCAGAAGT CCCATCACTT TGATTCAAAC TAATGTCCAA GTTGCTTTAG CTGATTTAGA GTTGACTGAA ACTGAAGCCG CTACATCTTC CAATTATCGC CAACAATTAA AGGTAGTGGA ACGGTTAACC CAGCGTTTGG GTAAGTTAGT TAATGACTTA TTATTTCTAG CACGTCAGGA CAGTGGTGTA AGCAGAGATG GTTTTTCATC TTGTCCCCTT GATGCTTTAC TGATGGATGT GGTGGAAGAA CAACAGCTTG TAGCTACAGA AAAAGCAATT ACTCTGAATT TGCACTTAAT TGATCCTGCT GATTCTGAAA CTAGTCCTGA ATTACTAGAA CATTGGTTCA CACTGGTGGG GAATTGGGAT CAACTGGTGC GATTATTCAC TAATTTAATT GGTAATGCTT TGCACTATAC ACCCCCAGGT GGGGCGGTGA ATGTGGAATT GGTGCGTGTA GATAGAGTTC GCTATAATAC ATCGCAGTTA CAAATTAAGG TGAGTGATAC GGGAATTGGT ATTCCGGCTG AAGCATTACC GCGATTATTT GATCGTTTTT ATCGAGTTGA TCCTGCACGC ACTCATAAGA GTGGGAATGT AGGTAAAGAT AATGCTACAG GTTCAGGATT GGGACTAGCG ATCGCGCAAG CTATTGTGGA ACATCACCAC GGTAACATTC AAGTCGAAAG CACTGTAGGT AACGGTACTA CTTTTATTGT CACTTTACCC ATAACTCTAG AGTCTTAA
|
Protein sequence | MFQATRRRLA IWYTAVTAVL LLLFASGVYL YVRSTLVERI DDTLSHVVEI VERSLVIEPV NGEPEKLRIN VEASFRNNAN TVEDDHIDLE WFSPTGDLIW STFSEPLNIP IHSNRTGETV HVFKQDRWTN SKTQNSALTN QDSGLLLRQV TQRVEFGRQV LGYLRVSHPW FEVTKPSRQL IFDLALGTGL MVISVAASGW FLSGKAMEPV GESYQRLKQF TADASHELRS PITLIQTNVQ VALADLELTE TEAATSSNYR QQLKVVERLT QRLGKLVNDL LFLARQDSGV SRDGFSSCPL DALLMDVVEE QQLVATEKAI TLNLHLIDPA DSETSPELLE HWFTLVGNWD QLVRLFTNLI GNALHYTPPG GAVNVELVRV DRVRYNTSQL QIKVSDTGIG IPAEALPRLF DRFYRVDPAR THKSGNVGKD NATGSGLGLA IAQAIVEHHH GNIQVESTVG NGTTFIVTLP ITLES
|
| |