Gene Ava_3149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3149 
Symbol 
ID3680783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3911496 
End bp3912053 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content44% 
IMG OID637718498 
Producthypothetical protein 
Protein accessionYP_323652 
Protein GI75909356 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00139677 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAA CCAAAGTCCG CTTGTGGAAC GTAGAAGAAT ATCACCGGAT GTTAGCGGCC 
GGTATTATTG CCCCTGATGA ACGAGTAGAA CTGATTGCTG GGCAAGTAAT TCCGATGAGT
GCGAAAAATC CTCCCCATGC AGCCATAACT CTGTGTGCTT CTGATTATCT CAAGCGGCTG
TTGGCGGGAG TTGCCTTAGT TCGTGTACAA GATCCCGTGC AGTTAAGCCA ATACTCTGAA
CCTGAGCCAG ATATTGCCAC TGTTCGCATC GAGCCGCGTA AATACATTGA CCACCATCCT
ACAGCTGATG AAGTATTTTT ATTAATTGAG GTGGCAGATA CAACCCTAGA GACAGATCGT
AAACAAAAAG CACCTCTCTA TGCCCAAGGT GGCATTAGTG AATACTGGAT TTTAGATGTC
AATAAATTTC AGGTTTATGT TTTCCGCGAA CCAAATGGGG AGGCTTACAC CCAAGAATTT
ATTTTAGAGG AGAATGCAAC GTTATCTTTG GTTGCTTTTC CAAAAATAGA CATCCAAATT
AGTCAACTGT TTCCATGA
 
Protein sequence
MTQTKVRLWN VEEYHRMLAA GIIAPDERVE LIAGQVIPMS AKNPPHAAIT LCASDYLKRL 
LAGVALVRVQ DPVQLSQYSE PEPDIATVRI EPRKYIDHHP TADEVFLLIE VADTTLETDR
KQKAPLYAQG GISEYWILDV NKFQVYVFRE PNGEAYTQEF ILEENATLSL VAFPKIDIQI
SQLFP