Gene Ava_3139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3139 
Symbol 
ID3680773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3902597 
End bp3903097 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content45% 
IMG OID637718488 
Product4-hydroxybenzoyl-CoA thioesterase 
Protein accessionYP_323642 
Protein GI75909346 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACG AACAATCAAA CCAATCCCAA TTACCACCAA CCAACGCCAT CGAAGTTTCA 
TCATTACGTC AGTTTGATAG TTGGTTTGAG TATCCGGTGA GAGTTCATCC CCACCATACT
GACTATGCAG GTATTGTTTG GCATGGTACC TATTTAACTT GGATGGAAGA AGCCAGAGTA
GAATGTTTGC GTTCTATTGG CATTGAGTTT GCTGATTTAG TTGCCTTAGG CTGTGACTTA
CCTGTAGTAG AACTTTCTAT CCGCTATCAT CGTTCAGTTC AGCTAGGTAT GGCGGTGGTG
GTAAAAGCGC GGATGATAGA TGTGACTGGT GTCCGGATCA ACTGGGATTA CGCTATTGTC
TCCACTGATG GACGGCAACT ATTTGTTACT GCCAAAGTGA CATTAGTGGC CTTGGATAGA
GATAGGGGTA AGATCATGCG TCAGTTACCC AGCAACGTCA AGGATGCTTT GGCAAAGGTG
TCTGCCTTAC ACAATAACTA A
 
Protein sequence
MSDEQSNQSQ LPPTNAIEVS SLRQFDSWFE YPVRVHPHHT DYAGIVWHGT YLTWMEEARV 
ECLRSIGIEF ADLVALGCDL PVVELSIRYH RSVQLGMAVV VKARMIDVTG VRINWDYAIV
STDGRQLFVT AKVTLVALDR DRGKIMRQLP SNVKDALAKV SALHNN