Gene Ava_3128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3128 
Symbol 
ID3680796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3883875 
End bp3884417 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content44% 
IMG OID637718472 
Productbifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase 
Protein accessionYP_323631 
Protein GI75909335 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACGC CTGTCAAAGT GGTTGAAATT CTTTCCGCCG AAGACCTCCG CCGTACTTTA 
ACGCGATTGG CATCTCAAAT TGTTGAAAGA ACACGGGATT TATCTCAATT AGTCCTACTA
GGTATTTACA CTAGGGGCGT GCCACTAGCG GAACTACTAG CACGTCAAAT TGAAACCCTA
GAAGGTATTA ATGTCGGTGT AGGAGCTTTA GACATTACCT TCTATCGGGA CGACCTTGAC
CAAATTGGTT TACGAACGCC AGCTAAAACC AGCATTACGC TCGACTTGAC TGGAAAAACA
GTTGTTTTGG TAGATGATGT CATCTTTAAA GGACGGACAA TTCGTGCAGC TTTAAATGCC
GTTAACGAGT ACGGTAGGCC AGAAGTAATT CGTCTAGCGG TGTTGGTTGA CAGGGGTCAT
AGGGAAGTCC CCATCCATCC AGATTTTGTT GGTAAGCAGT TACCCACAGC GAAAGAAGAA
GTGGTCAAAG TTTATTTACA AGATTGGGAT GGCAGAGATG CGGTGGAATT AGTTGGTTAT
TAA
 
Protein sequence
MATPVKVVEI LSAEDLRRTL TRLASQIVER TRDLSQLVLL GIYTRGVPLA ELLARQIETL 
EGINVGVGAL DITFYRDDLD QIGLRTPAKT SITLDLTGKT VVLVDDVIFK GRTIRAALNA
VNEYGRPEVI RLAVLVDRGH REVPIHPDFV GKQLPTAKEE VVKVYLQDWD GRDAVELVGY