Gene Ava_3125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3125 
Symbol 
ID3680793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3881517 
End bp3881930 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content41% 
IMG OID637718469 
Producttranscriptional regulator AbrB 
Protein accessionYP_323628 
Protein GI75909332 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAAC AGAAAAAAAT AGAACCCCTA GTCGGTGAAG AACTGCTCAA AAAAGTCAAA 
GAGCTAGAGA ACCTAAGCAA AGAAGAAAAA GCTAAACAGT GTGGCTACTA TACCGTTACC
AAAAATGGTA TAGAGCGTGT CAATATGATG AAATTCTTGA ACGCCCTAAT TGATGCGGAA
GGCATTCAGT TAGATAGCGC TCCTAATGCC AACGGACGTG GTGGACGGAG TGCTAGTTAT
AGAATTAGTG TGCAATCGAA TGGCAACTTG TTGATTGGTT CAGCTTATAC AAAACAGATG
AACCTCAAGC CAGGAGATGA GTTTGTCATC ACTTTAGGGA AAAAGCACAT CCGTCTTAGA
CAAGTAGATG GCGAAGAAAG AGAAATCCTG GAAATCGCAG AAGCTACAGC ATAA
 
Protein sequence
MPKQKKIEPL VGEELLKKVK ELENLSKEEK AKQCGYYTVT KNGIERVNMM KFLNALIDAE 
GIQLDSAPNA NGRGGRSASY RISVQSNGNL LIGSAYTKQM NLKPGDEFVI TLGKKHIRLR
QVDGEEREIL EIAEATA