| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3112 |
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| Symbol | |
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| ID | 3680858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 3866325 |
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| End bp | 3867845 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637718456 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_323615 |
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| Protein GI | 75909319 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02730] carotene isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.270711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTAA CCTCAACTAC TTCCCAAAAT TCTTTGTTTG ATGTCATCGT GATTGGGTCT
GGCATTGGCG GACTAGTGAC AGCAACCCAA CTCGCCGCCA AGGGAGCGAA AGTTCTGGTA
CTAGAAAGCT ATATCATTCC TGGTGGGAGT GCTGGCTACT TTGAGCGTCA AGGCTATCGA
TTTGACGTTG GGGCTTCCAT GATTTTCGGC TTAGGGAACA GAGGGACTAC AAACTTACTC
ACCCGTGCTT TACAAGCTGT AAATAGTAGT GTAGAGGCGA TCGCTGATCC CGTACAAATC
CATTACCACT TACCCAGCAA CTTAAACCTG AAAGTTGACC GGGTTTATGA TAAGTTTTTG
CAAAATCTTG CTGCTTACTT TCCTCATGAA ACAAAAGGGA TTCGTCGCTT TTATGACGAA
TGTTGGCAAG TGTTTAAGTG TCTCAACCGC ATGGATTTGT TGTCATTAGA AGAACCTCGG
TATTTGCTGC GAACGTTTTT ACAGCATCCT TTAGCGTGTC TAGGTTTACT TAAGTATCTA
CCTCAAAATG TCGGAGATAT CGCCCGTCGC TACATCAGAG ACCCAGAATT ATTGAAATTT
ATCGATATAG AATGTTACTG CTGGTCTGTA GTGCCAGCAG CGATGACACC GATGATTAAT
GCAGGTATGG TCTTTTCTGA CAGGCATTAT GGCGGTGTTA ACTACCCCAA AGGTGGAGTA
GGTCAAATTG CCCAAAAACT TGCAGAGGGC TTAGAAAAAG TCGGTGGTGA GATTCGATAT
CAAGCCAAAG TAGCAAAAAT CATTACTGAA AAATACCGTG CTGTCGGTGT ACAACTAACT
AATGGTGAAA TTTATCGAAG CAAACGGATA GTTTCTAATG CTACACGGTG GGACACATTT
GAAAAATTGC TACCTGTAGA TAAAATGCCA TCTAATGAGA AAGATTGGCA ACACAGCTAT
AAAAAATCGC CCAGTTTTCT GAGTTTACAC ATGGGGGTGA AAGAGTCCGT CTTACCTCAA
GGGACAGAAT GCCATCACAT TATCTTGGAA GATTGGCAAA ACATGACCCA AGCAGAAGGT
ACACTGTTTG TCTCCATACC CACATTACTT GATCCAGAAT TAGCCCCAGA GGGATGCCAT
ATAATTCATG CCTTTACGCC TCATTGGATA AATGATTGGC AAGGGTTTTC TGTGAGTGAC
TACGAAGCGA AGAAAGAAGA GACAGCCTGG CGAATTATTG ACCGACTAGA GAAGATTTTT
CCTGGTTTAG ATGCGGGTTT AGATTATTTA GAAGTAGGCA CACCCCGCAC CCATCGCCGC
TTTTTAGGAC GAGAAGACGG CACTTATGGC CCCATCCCCA GACGTAAACT GCGGGGGTTA
TTGTCCATGC CCTTTAATCG CACCGCTATC AAGGGACTGT ATTGTGTGGG AGACAGCACA
TTTCCCGGAC AGGGTTTAAA TGCAGTCGCC TTTTCCGGCT TCGCCTGCGC CCATCGCATC
GCCGTAGATT TAGGACTGTG A
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| Protein sequence | MSVTSTTSQN SLFDVIVIGS GIGGLVTATQ LAAKGAKVLV LESYIIPGGS AGYFERQGYR
FDVGASMIFG LGNRGTTNLL TRALQAVNSS VEAIADPVQI HYHLPSNLNL KVDRVYDKFL
QNLAAYFPHE TKGIRRFYDE CWQVFKCLNR MDLLSLEEPR YLLRTFLQHP LACLGLLKYL
PQNVGDIARR YIRDPELLKF IDIECYCWSV VPAAMTPMIN AGMVFSDRHY GGVNYPKGGV
GQIAQKLAEG LEKVGGEIRY QAKVAKIITE KYRAVGVQLT NGEIYRSKRI VSNATRWDTF
EKLLPVDKMP SNEKDWQHSY KKSPSFLSLH MGVKESVLPQ GTECHHIILE DWQNMTQAEG
TLFVSIPTLL DPELAPEGCH IIHAFTPHWI NDWQGFSVSD YEAKKEETAW RIIDRLEKIF
PGLDAGLDYL EVGTPRTHRR FLGREDGTYG PIPRRKLRGL LSMPFNRTAI KGLYCVGDST
FPGQGLNAVA FSGFACAHRI AVDLGL
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