| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3052 |
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| Symbol | |
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| ID | 3681131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 3783217 |
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| End bp | 3786753 |
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| Gene Length | 3537 bp |
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| Protein Length | 1178 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637718398 |
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| Product | methionine synthase (B12-dependent) |
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| Protein accession | YP_323557 |
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| Protein GI | 75909261 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCATC CTTTCCTGAA ACGCCTGCAC AGTCCGGAAT TTCCGGTTAT CGTCTTCGAC
GGTGCAATGG GAACTAATCT ACAAACCCAA AACCTCACGG CTGAGGATTT CGGGGGTGTG
CAGTATGAAG GTTGTAACGA ATACCTAGTC CACACCAAAC CTGAAGCTGT CGCCAAGGTT
CACCGCGACT TTCTCGCCGT GGGTGCAGAT GTTATCGAAA CTGATACTTT CGGCGCGACA
TCGATTGTTT TGGCAGAATA TGATTTAGCA GACCAAACGT ATTACCTGAA TAAGAAAGCT
GCTGAATTAG CGAAAAGTGT TGCTGCTGAA TTCTCCACCC CGGATAAACC CCGGTTTGTC
GCCGGTTCCA TCGGCCCCAC AACCAAACTT CCCACCTTAG GACATATTGA CTTTGACACC
CTCAAAACTG CTTTTGCTGA ACAAGCAGAA GCACTGTTAG ATGGTGGTGT GGATTTACTT
TTGGTGGAGA CTTGCCAAGA TGTGCTGCAA ATCAAAGCGG CGCTGAATGG GATTGAAGAA
GTTTTCGCCA AGAGAGGGGA ACGCATACCC CTCATGGTGT CCGTGACAAT GGAAAGTATG
GGGACAATGT TGGTCGGTTC CGAAATCAAC GCCGTCCTGA CAATTTTAGA ACCTTTCCCA
ATTGATATTC TCGGTCTGAA CTGTGCCACA GGCCCAGACT TGATGAAACC ACATATTAAA
TATTTGGCTG AACATTCGCC CTTTGTGGTT TCTTGTATTC CTAATGCGGG TTTACCGGAA
AACGTTGGAG GTCAAGCACA CTACCGCTTA ACACCAATGG AATTACGTAT GGCGTTGATG
CACTTTGTTG AAGATTTGGG TGTCCAAGTG ATCGGGGGTT GCTGTGGGAC ACGTCCAGAA
CACATTCAAC AATTGGCGGA AATTGCCAAG GACTTAAAGC CGAAGGTGAG ACAACCAAGT
TTAGAACCTG CGGCTGCATC AATATATAGT ACTCAAACCT ACGAACAAGA TAATTCTTTC
TTGATTGTGG GTGAACGTCT CAACGCCAGT GGTTCCAAAA AATGCCGTGA TTTGCTAAAT
GCGGAAGATT GGGACGGATT GGTATCAATG GCGCGATCGC AAGTCAAGGA AGGCGCACAT
ATCCTGGATG TCAACGTGGA TTATGTGGGA CGGGACGGTG TGCGAGATAT GCACGAACTA
GTTTCCCGCA TTGTGAATAA TGTCACACTC CCCTTAATGC TCGACTCCAC CGAATGGGAA
AAGATGGAGG CGGGATTGAA GGTAGCTGGT GGTAAGTGTT TGCTAAACTC CACCAACTAC
GAAGATGGGG AACCACGTTT TTTAAAAGTG CTGGAGTTGG CAAAGAAATA CGGTGCTGGT
GTTGTCATTG GTACAATCGA CGAAGAAGGA ATGGCGCGGA CGGCAGAGAA AAAGTTTCAA
ATTGCCCAGC GTGCCTATCG TCAAGCGGTA GAATATGGGA TTCCCCCCAC AGAAATATTC
TTTGATACCT TAGCGCTACC AATTTCCACA GGGATTGAAG AAGACAGGGA AAATGGCAAG
GCGACAATTG AATCAATTAG CCGTATCCGT CAGCAATTGC CAGGGTGTCA CGTTATTTTA
GGGGTGTCCA ATATATCCTT TGGCTTGAGT CCAGCTTCCC GGATGGTCTT AAACTCTGTG
TTTCTCCATG AAGCAACGGC AGCTGGCATG GATGCAGCGA TCGTCAGTGC TAGCAAGATT
CTACCACTCT CGAAGATTGA AGACCGTCAT CAGGAGGTAT GCCGCCAGTT AATTTATGAC
CAGCGCCAAT TTGACGGCGA TGTCTGCATC TACGACCCCT TAACAGAACT AACCAAATTA
TTTGAGGGAG TCACCACCAA ACGCAACAAA GGCGTTGATG AAAGCTTACC CATCGAAGAA
CGCCTCAAAC GCCACATTAT CGACGGAGAA CGCATTGGTT TAGAAGCGCA ACTGACAAAA
GCCTTAGAAC AATATCCCCC CCTAGAAATT ATCAACACTT TCTTACTAGA TGGGATGAAA
GTAGTCGGGG AATTGTTCGG TTCCGGACAA ATGCAGCTAC CTTTCGTTTT ACAGTCAGCC
GAAACCATGA AAGCGGCGGT AGCCTACCTA GAACCGTTCA TGGAAAAATC GGAAAGTGGC
AATAATGCCA AGGGTAAAGT AATTATTGCC ACCGTGAAAG GCGATGTTCA CGACATTGGT
AAAAACCTAG TGGATATTAT CTTGTCCAAC AACGGCTACA AGGTAATTAA CCTGGGAATT
AAACAGCCGG TGGAAAATAT CATCGAAGCT TACAACCAAC ACAAAGCTGA TTGTATTGCC
ATGAGTGGCT TGCTAGTAAA ATCCACCGCA TTCATGAAAG AGAATTTGGA GGTTTTCAAC
GAAAAAGGCA TTAATGTTCC TGTAATTTTA GGTGGTGCGG CATTAACCCC GAAATTCGTG
CATAAAGATT GCCAAAACAC CTACAAAGGT AAAGTCATCT ACGGCAAAGA TGCTTTCTCA
GACCTACATT TCATGGATAA ATTAATGCCA GCCAAAGCCA CTGGTAAATG GGACAATTTC
TTAGGATTCT TGGATGAAGT AGAAACCGAG GAAACAGAAC CTACCAATTC CCAATCCCCA
GTCCCCAATT CCCAATCCCC AGTCCCCAGT CCCCAATCCC CAGTCCCCGT AGACACCAGA
CGTTCCGAAG CCGTAGCCGT AGACATCCCC CGTCCCACAC CACCATTCTG GGGAACCCAA
TTATTACAGC CTAGCGATAT TTCCTTAGAA GAAATATTCT GGCATATGGA TTTGCAAGCC
TTGGTTGCAG GACAATGGCA ATTCCGCAAA CCCAAAGAAC AATCAAAGGA AGAATATCAA
GCCTTCCTAA ATGAGCAAGT TTATCCAATT TTAGAAACTT GGAAACAGCG CATCATTGCA
GAAAACCTGT TACATCCCCA GGTAATTTAT GGGTATTTTC CTTGTCAATC TGAGGGTAAT
ACTTTGTATG TTTACGACAG TAACAGCCCA AATGCCAAAG AAATCACTCA GTTTGAATTT
CCCCGACAAA AGTCATCAAG AAGATTGTGC ATTGCCGATT TCTTTGCACC GAAAGATTCG
GGAATCATCG ATGTCTTCCC CATGCAGGCG GTGACTGTAG GAGATATTGC TACAGAGTTC
GCGCAAAAAC TGTTTGCGAA TAATCAGTAC ACTGATTATC TTTATTTTCA CGGTTTAGCG
GTGCAAGTAG CAGAAGCCTT GGCTGAGTGG ACACACGCCA GAATCCGCCG TGAGTTAGGG
TTCGGTGCTG AAGAACCGGA CAATATCCGG GATATTTTGG CACAACGCTA TCAGGGTTCC
CGGTATAGTT TTGGCTACCC AGCTTGTCCC AATATTCAAG ACCAGTTTAA GCAGCTGGAT
TTGTTGGAGA CTAGCCGAAT TAATTTATAC ATGGATGAAA GTGAGCAACT TTATCCAGAA
CAGTCTACAA CGGCGATTAT TACCTATCAC CCAGTAGCTA AGTACTTTAC GGCGTAG
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| Protein sequence | MTHPFLKRLH SPEFPVIVFD GAMGTNLQTQ NLTAEDFGGV QYEGCNEYLV HTKPEAVAKV
HRDFLAVGAD VIETDTFGAT SIVLAEYDLA DQTYYLNKKA AELAKSVAAE FSTPDKPRFV
AGSIGPTTKL PTLGHIDFDT LKTAFAEQAE ALLDGGVDLL LVETCQDVLQ IKAALNGIEE
VFAKRGERIP LMVSVTMESM GTMLVGSEIN AVLTILEPFP IDILGLNCAT GPDLMKPHIK
YLAEHSPFVV SCIPNAGLPE NVGGQAHYRL TPMELRMALM HFVEDLGVQV IGGCCGTRPE
HIQQLAEIAK DLKPKVRQPS LEPAAASIYS TQTYEQDNSF LIVGERLNAS GSKKCRDLLN
AEDWDGLVSM ARSQVKEGAH ILDVNVDYVG RDGVRDMHEL VSRIVNNVTL PLMLDSTEWE
KMEAGLKVAG GKCLLNSTNY EDGEPRFLKV LELAKKYGAG VVIGTIDEEG MARTAEKKFQ
IAQRAYRQAV EYGIPPTEIF FDTLALPIST GIEEDRENGK ATIESISRIR QQLPGCHVIL
GVSNISFGLS PASRMVLNSV FLHEATAAGM DAAIVSASKI LPLSKIEDRH QEVCRQLIYD
QRQFDGDVCI YDPLTELTKL FEGVTTKRNK GVDESLPIEE RLKRHIIDGE RIGLEAQLTK
ALEQYPPLEI INTFLLDGMK VVGELFGSGQ MQLPFVLQSA ETMKAAVAYL EPFMEKSESG
NNAKGKVIIA TVKGDVHDIG KNLVDIILSN NGYKVINLGI KQPVENIIEA YNQHKADCIA
MSGLLVKSTA FMKENLEVFN EKGINVPVIL GGAALTPKFV HKDCQNTYKG KVIYGKDAFS
DLHFMDKLMP AKATGKWDNF LGFLDEVETE ETEPTNSQSP VPNSQSPVPS PQSPVPVDTR
RSEAVAVDIP RPTPPFWGTQ LLQPSDISLE EIFWHMDLQA LVAGQWQFRK PKEQSKEEYQ
AFLNEQVYPI LETWKQRIIA ENLLHPQVIY GYFPCQSEGN TLYVYDSNSP NAKEITQFEF
PRQKSSRRLC IADFFAPKDS GIIDVFPMQA VTVGDIATEF AQKLFANNQY TDYLYFHGLA
VQVAEALAEW THARIRRELG FGAEEPDNIR DILAQRYQGS RYSFGYPACP NIQDQFKQLD
LLETSRINLY MDESEQLYPE QSTTAIITYH PVAKYFTA
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