Gene Ava_3048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3048 
Symbol 
ID3681127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3778117 
End bp3779298 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content47% 
IMG OID637718394 
Productchromate transporter 
Protein accessionYP_323553 
Protein GI75909257 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2059] Chromate transport protein ChrA 
TIGRFAM ID[TIGR00937] chromate transporter, chromate ion transporter (CHR) family 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACAGG AAGCTGTTTC CTATGATGAG CTGACTCCCA AACAACAGCA GCAGCGATTA 
AGAGAATTAG CGGTGGTATT TTTGCGACTA GGAGCGATCG CCTTTGGTGG CCCGGCTGCT
CATATTGCCA TGATGGATAA TGAGGTAGTG AATCGCCGTC GGTGGATGAG TCGGGAGAAA
CTGCTGGATT TGTTGGGAAT CACAAATTTG ATTCCTGGCC CCAACTCGAC GGAATTAGCT
ATACACATAG GCTACGAACA AGGCGGATGG CGTGGTTTAT TGGTGGCGGG TAGTTGCTTT
ATTCTCCCGG CTATGCTTAT AGTCTGGATA TTAGCCGCCA TTTATGACCG TTATCAAACT
GTGCCACAGG TGGGATGGCT ACTATATGGG ATTAAACCTG TAATTGTGGC GATCGTGCTG
CAAGCTGTGT GGAATCTGGG TAAAAAGGCA GCTAAAGACT TACCTACGAG AATTGCTGGA
GTGATAGCCG TAGCCGCCTA CTTTGCCGGA TTGAATGAAA TTTTGCTGCT AATTTTGCTA
GGTGTCGCCG TTATGGTGCT GAAGAATTGG CACAATCGGG GGCGTATCAC CGGAGCATTT
TTACTGCCAT TCTCAGGTAT TCTCGCTCAA GTTGGGACAA CAACAGCAGC AGTCACCTCA
GTTACTTGGC TGAGTGTGTT TCTCTTCTTT CTGAAGATTG GCTGTATTCT CTACGGTAGT
GGTTATGTGT TGCTGGCGTT TCTGCAACGG GATTTAGTTG AACGCAACCA ATGGCTGACA
TCACAGCAGC TTCTAGATGC GGTAGCTATT GGACAGTTTA CACCGGGGCC TGTGTTTACT
ACTGCCACAT TTATTGGATA CTTGTTGGCA GGAAATGCGG GAGCGATCGC TGGTACTATC
GGTATATTCT TACCAGCTTT CCTACTGGTG TGGGTAGTTA ACCCTTGGGT GACTAAGTTG
CGTCAATCTC CCTGGGCTAG TGGGTTTCTC GATGGCGTGA ATGCAGCCTC CCTGGGATTA
ATGGTAGGTG TAACTTACAC CTTGGGACAA ACCGCACTAG TGGATTGGTT AACCATTATT
TTGGCAATTA TGAGTGCGAT CGCTGTATTC CGATTTAAAA TCAATTCTGC CTGGTTAGTG
CTAGCAGGAG GAGCGATCGG ATTTGCCTCA CATATATTTT AG
 
Protein sequence
MTQEAVSYDE LTPKQQQQRL RELAVVFLRL GAIAFGGPAA HIAMMDNEVV NRRRWMSREK 
LLDLLGITNL IPGPNSTELA IHIGYEQGGW RGLLVAGSCF ILPAMLIVWI LAAIYDRYQT
VPQVGWLLYG IKPVIVAIVL QAVWNLGKKA AKDLPTRIAG VIAVAAYFAG LNEILLLILL
GVAVMVLKNW HNRGRITGAF LLPFSGILAQ VGTTTAAVTS VTWLSVFLFF LKIGCILYGS
GYVLLAFLQR DLVERNQWLT SQQLLDAVAI GQFTPGPVFT TATFIGYLLA GNAGAIAGTI
GIFLPAFLLV WVVNPWVTKL RQSPWASGFL DGVNAASLGL MVGVTYTLGQ TALVDWLTII
LAIMSAIAVF RFKINSAWLV LAGGAIGFAS HIF